Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1966 ATGGGTACCTGTTATGCACCTTCTAATGCTAGGAATTCGGCGGGGGTGCTGGCTGTTGTTGGAGGAAGAACAATTTCTGAGAATCACGGTGGCAGATCGTGCTCTTTGAAAATTCAAGAGAGCAAGTATGTGTTTGGCAGCAGTAGAAAGTGTGGTTCGATTCAAGTGAAGTGCTCCACGAATTCCCACAGCATTAGTCGCAAGGATCCTTTTCTGGATCTGCACCCTGAGGTTTCAATGCTTAGAGGAGAAGGAGGGAGTGCATTGAACAACCCTAGACCTAGAAAGGATGTATCAAGTGGAAAGGTAGCTGAAAGTTTCGAAGCCACCATGAATCCAAGTAACTACAATGAAGCTAAGATCAAAGTCATTGGTGTGGGTGGAGGTGGGTCAAATGCAGTCAACCGTATGATAGAGAGCTCCATGAATGGTGTGGAGTTCTGGATTGTTAATACTGATGTTCAAGCCATGAGAATGTCACCAGTCATTCCTCAGAACCGGTTGCAAATTGGTGAGGAGCTTACACGAGGTCTTGGCGCCGGTGGTAACCCTGAGATTGGTATGAATGCTGCCAAGGAAAGCGAGGAATCAATACAGGAGGCAGTTTATGGATCTGACATGGTTTTTGTTACTGCCGGAATGGGTGGAGGAACTGGCACTGGTGGAGCACCAGTTATTGCTGGTATCACAAAATCAATGGGTATACTGACTGTCGGTATTGTCACAACTCCTTTTTCTTTTGAAGGACGAAGACGGGCAGTTCAAGCACAAGAAGGAATTGCAGCATTAAGAGATAATGTTGATACACTCATAGTTATTCCAAATGACAAGCTACTGACTGCAGTTTCTCAATCTACCCCTGTAACTGAAGCATTCAATCTGGCTGATGATATTCTTCGACATGGTGTTCGTGGCATATCTGATATTATTACGATACCAGGATTGGTAAATGTAGACTTTGCTGATGTTCGAGCTATAATGGCTAACGCAGGTTCTTCACTTATGGGGATAGGAACTGCAACTGGGAAAACAAGGGCAAGAGATGCTGCATTAAATGCTATCCAGTCACCTTTACTAGATATTGGTATAGAAAGGGCTACTGGAATTGTCTGGAACATAACTGGTGGAAGTGATTTGACCTTGTTTGAGGTAAATGCTGCAGCTGAAGTTATATATGATCTTGTGGATCCCACTGCTAATTTAATATTTGGAGCAGTAATAGATCCATCGCTCAGTGGTCAAGTAAGCATAACACTAATTGCTACTGGATTCAAGCGTCAAGAGGAAAGTGAAGGGAGGCCTACACAGGGCAGTCAACTCATGCAAGGAGAAACCATTGGTATCAATCGGCGATCTTCCTCTTTCACTGATGGTGGTTTTGTTGAGATCCCTGAATTCTTAAAGAAGAAGGGGCGCTCACGTTATCCAAGAGCTTAA 1437 0.4412 MGTCYAPSNARNSAGVLAVVGGRTISENHGGRSCSLKIQESKYVFGSSRKCGSIQVKCSTNSHSISRKDPFLDLHPEVSMLRGEGGSALNNPRPRKDVSSGKVAESFEATMNPSNYNEAKIKVIGVGGGGSNAVNRMIESSMNGVEFWIVNTDVQAMRMSPVIPQNRLQIGEELTRGLGAGGNPEIGMNAAKESEESIQEAVYGSDMVFVTAGMGGGTGTGGAPVIAGITKSMGILTVGIVTTPFSFEGRRRAVQAQEGIAALRDNVDTLIVIPNDKLLTAVSQSTPVTEAFNLADDILRHGVRGISDIITIPGLVNVDFADVRAIMANAGSSLMGIGTATGKTRARDAALNAIQSPLLDIGIERATGIVWNITGGSDLTLFEVNAAAEVIYDLVDPTANLIFGAVIDPSLSGQVSITLIATGFKRQEESEGRPTQGSQLMQGETIGINRRSSSFTDGGFVEIPEFLKKKGRSRYPRA* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1966 478 Pfam FtsZ family, C-terminal domain 331 425 IPR024757 -
Pvu1g1966 478 SUPERFAMILY Tubulin C-terminal domain-like 313 427 IPR008280 -
Pvu1g1966 478 PANTHER CELL DIVISION FTSZ-LIKE PROTEIN 2 476 - -
Pvu1g1966 478 SUPERFAMILY Tubulin nucleotide-binding domain-like 119 317 IPR036525 -
Pvu1g1966 478 Hamap Cell division protein FtsZ [ftsZ]. 116 447 IPR000158 GO:0003924|GO:0005525
Pvu1g1966 478 PRINTS Cell division protein FtsZ signature 207 227 IPR003008 GO:0005525
Pvu1g1966 478 PRINTS Cell division protein FtsZ signature 235 256 IPR003008 GO:0005525
Pvu1g1966 478 PRINTS Cell division protein FtsZ signature 298 320 IPR003008 GO:0005525
Pvu1g1966 478 PRINTS Cell division protein FtsZ signature 321 342 IPR003008 GO:0005525
Pvu1g1966 478 SMART Tubulin_C_4 316 433 IPR018316 -
Pvu1g1966 478 Gene3D - 330 442 IPR037103 -
Pvu1g1966 478 PANTHER CELL DIVISION PROTEIN FTSZ-RELATED 2 476 IPR045061 GO:0003924|GO:0005525
Pvu1g1966 478 ProSitePatterns FtsZ protein signature 2. 206 227 IPR020805 GO:0005525
Pvu1g1966 478 Gene3D Tubulin/FtsZ, GTPase domain 109 329 IPR036525 -
Pvu1g1966 478 SMART Tubulin_4 120 314 IPR003008 GO:0005525
Pvu1g1966 478 Pfam Tubulin/FtsZ family, GTPase domain 120 281 IPR003008 GO:0005525
Pvu1g1966 478 TIGRFAM ftsZ: cell division protein FtsZ 113 436 IPR000158 GO:0003924|GO:0005525
Pvu1g1966 478 CDD FtsZ_type1 131 423 IPR000158 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1966 Pvu-Chr1 45594135 45599660 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1966 K03531 - gmx:100793382 842.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1966 1 45594135 45599660 Pvu1g1966 1 45594135 45599660 ECH