Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1963 ATGGACCACCTTCCCGTTGAAGTGATCGGTAACATATTGTCTCTTCTCGGCTCTGCCCGGGATGTTGTGGTTGCTTCTGCAACTTGCAAGAAATGGAGGGAAGCATGGCGCAGTCACCTTCACAGTCTTTCTTTCAATTATTGTGACTGGCCTCTCTATCATGAATATACCTCTCCTAGGTTGGAAATACTCATCACTCAGACCATTTTTCAAACCAAGGCACTGCAATTTTTGACCATTTTCATGGATGATGACCATGAGTTCTCTGCTGCCCCTGTCATTGCTTGGCTTATGTACACTAGGGATTCCTTGCGCCAATTGCATTACAATGTGAGGACTAACCCCAGTTTCAACATCATCGAGAAATGCAGCAGGCATAGGCTGGAGGTGTTGGCATTGGCTCGCAATTCCATCGTAGGTGTGGAGCCAGGTTATTTGAAGTTTCCTTGCTTGAAGTCGCTTTCGTTGAGTTTTGTTAGCATCTCGGCGTTGGATTTGAGCCTTCTGTTGTCGTCTTGTCCAAAGCTTGAAACCTTGGCTATGGTTAGCCCAGAGATTGCAATATCAGATTCTCAGGCTTCAGTGGAGCTTATCAGTGTTTCTTTGAAGAATTTCCACCTTGAATTGTTTAGTTCGGATAAGTTTATATTGGATGTGGATTTGCTCGAGACACTTCATTTGAAAGATTGTACCTTTGAGATTTTTGAGCTGGTTGGAAAGGGAACACTGAAAGCGTTGAAAATTGATGACGTGAGTGTTATCCATCTTGATATTGGGGATGGTACGGAGAACCTTGAGATTATAGATGTCTGCAACTTCACAATCATGTGGCCAAAGTTTTATCACGTGATCTCAAAAGCATCAAAGTTATATAAGCTTCGGCTGTGGGGTGTTGTTTTTGATGATGAGGATGAGGTTGTTGATATAGAGACAATTTCTGTTTGCTTTCCTCAATTGAGGCATTTGTCGTTAAGTTATGATTTAAGAGATGGAGTGCTTCATTATGGCTTGCAGGGTTTGTCTTGCTTGAAGAATGTGGTGGTCTTAGAACTTGGATGGACTGTAATCAGTGATCTTTTCTCCGTATGGGTTGCTGGACTTTTGGAAGGATGTCCCAATTTGAAAAAATTGGTCGTTTATGGTTATGTTTCAGAGGTCAAAACGCATGAAGAGTGCCAAATTCTTGCTAGATTCTCTGAATTCATTCTTCAACTAGGAAGAAAATATGGGCAAGTAAAATTTGAGTTTGAATATGAGTAG 1260 0.4175 MDHLPVEVIGNILSLLGSARDVVVASATCKKWREAWRSHLHSLSFNYCDWPLYHEYTSPRLEILITQTIFQTKALQFLTIFMDDDHEFSAAPVIAWLMYTRDSLRQLHYNVRTNPSFNIIEKCSRHRLEVLALARNSIVGVEPGYLKFPCLKSLSLSFVSISALDLSLLLSSCPKLETLAMVSPEIAISDSQASVELISVSLKNFHLELFSSDKFILDVDLLETLHLKDCTFEIFELVGKGTLKALKIDDVSVIHLDIGDGTENLEIIDVCNFTIMWPKFYHVISKASKLYKLRLWGVVFDDEDEVVDIETISVCFPQLRHLSLSYDLRDGVLHYGLQGLSCLKNVVVLELGWTVISDLFSVWVAGLLEGCPNLKKLVVYGYVSEVKTHEECQILARFSEFILQLGRKYGQVKFEFEYE* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1963 419 PANTHER F-BOX/LRR-REPEAT PROTEIN 1 417 - -
Pvu1g1963 419 SUPERFAMILY RNI-like 113 382 - -
Pvu1g1963 419 SMART fbox_2 4 47 IPR001810 GO:0005515
Pvu1g1963 419 SUPERFAMILY F-box domain 1 68 IPR036047 GO:0005515
Pvu1g1963 419 Pfam F-box-like 1 37 IPR001810 GO:0005515
Pvu1g1963 419 Gene3D - 2 40 - -
Pvu1g1963 419 PANTHER F-BOX PROTEIN-LIKE 1 417 - -
Pvu1g1963 419 Gene3D Ribonuclease Inhibitor 84 400 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1963 Pvu-Chr1 45583246 45585233 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1963 - - gmx:100792331 744.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1963 1 45583246 45585233 Pvu1g1963 1 45583246 45585233 ECH