Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1961 ATGGGGAGTGGAGTGAACACAAAATTTTGTGCAGCATCAACCCGTGCTCATTCCTGGAACCAAAACAAAACGACTTCAATTCACTTCCCTTCAGTGTTTGCAGTGTTGTTCATTGGACTTGTAGCATGGGGTTATCAGGCAATTCAATCTCCTCCCCCAAAGTTAGTCAAAATAAGAGATGGTGTTCCAAAAGATGTAGCCCATCATAAAATCATCTTTGTCCATGGTTTTGATGCTTGCAGGCATCATGCCTATGTGGCCAAAACCTTATCACCTGATGTTGCTGAGGATTTAGGGGTCTACATTGTATCTTTTGATAGACCAGGGTATGGGGAAAGCGATCTTCATCCCAGCCAAACTGTGAAGAGTCTGGCACTAGATATAGAAGAACTTGCTGATAAATTGGGACTAGGGTCCAAATTCTACATAATAGGTTTCTCTATTGGGGGTCAGGTAAGACATCAAGGAGAACATGAAAGTCTACACAGAGACATAATTCTTGCATTTGGTAGATGGGAATTTAGTCCTTTGGATCTGGAAAATCCATTTTCAAATAAAGAGGGTTGGGTTCATAGCTGGCAAGGAGATGAAGATTTGATAGTGCCTGTTAAACTTCAAGGTTCTGGCCATTTGTTCCCTCATCTTGATGGTATCAGTGATACCATTGTTAAGTCACTTTTAATTGCCCAGTAG 693 0.4141 MGSGVNTKFCAASTRAHSWNQNKTTSIHFPSVFAVLFIGLVAWGYQAIQSPPPKLVKIRDGVPKDVAHHKIIFVHGFDACRHHAYVAKTLSPDVAEDLGVYIVSFDRPGYGESDLHPSQTVKSLALDIEELADKLGLGSKFYIIGFSIGGQVRHQGEHESLHRDIILAFGRWEFSPLDLENPFSNKEGWVHSWQGDEDLIVPVKLQGSGHLFPHLDGISDTIVKSLLIAQ* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1961 230 Pfam alpha/beta hydrolase fold 71 151 IPR000073 -
Pvu1g1961 230 Gene3D alpha/beta hydrolase 45 152 IPR029058 -
Pvu1g1961 230 PANTHER HYDROLASE, ALPHA/BETA FOLD FAMILY PROTEIN, EXPRESSED-RELATED 151 229 - -
Pvu1g1961 230 PANTHER HYDROLASE, ALPHA/BETA FOLD FAMILY PROTEIN, EXPRESSED-RELATED 60 152 - -
Pvu1g1961 230 PANTHER HYDROLASE, ALPHA/BETA FOLD FAMILY PROTEIN, EXPRESSED-RELATED 7 60 - -
Pvu1g1961 230 SUPERFAMILY alpha/beta-Hydrolases 69 214 IPR029058 -
Pvu1g1961 230 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 60 152 - -
Pvu1g1961 230 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 151 229 - -
Pvu1g1961 230 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 7 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1961 Pvu-Chr1 45575103 45577109 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1961 - - pvu:PHAVU_001G189300g 477.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1961 1 45575103 45577109 Pvu11g0961 11 9498191 9500856 ECH
Pvu1g1961 1 45575103 45577109 Pvu1g1961 1 45575103 45577109 ECH
Pvu5g1285 5 34815232 34818804 Pvu1g1961 1 45575103 45577109 ECH
Pvu1g1961 1 45575103 45577109 Pvu7g2359 7 46949899 46954128 PCT