Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1960 ATGGGTAAACACTCTACCTTGAAAGGCATTATAAATATGGAGCTCACACTCCTTTTCTCAGCAGGTTATCGACTTGTATTCCTCACTCTCACTCTCTTAACTTTCTTCTCTCTTTATTTGTACCCTTATCATACTCTTGTAATGGCAAGAATGCCTTTAGAACCTCTTATAGTGGGGAGAGTCATAGGAGAGGTTCTTGACTCTTTTACCACAAGCATGAAAATGACTGTGAGTTATAACAAAAAGCAAGTCTACAATGGCCACGAGCTCTTCCCTTCATCTGTCAACACCAAACCCAAGGTTCAGATTGAGGGTGCTGATATGAGGTCCTTTTTCACACTGATCATGACAGACCCTGATGTTCCAGGCCCTAGTGACCCTTATCTCAGAGAACACTTGCACTGGATAGTGACAGATATTCCAGGCACAACAGATGCTACATTTGGGAAAGAGTTGGTGAGCTATGAGATCCCAAAGCCTAATATTGGGATCCATAGGTTTGTGTTTGTCCTGTTCAAGCAAAAGCGTAGGCAGTGTGTTACTCCACCAACTTCAAGGGATCACTTCAACACACGCAATTTCGCAGCACAGAACGACCTTGGCCTCCCAGTGGCTGCTGTCTACTTCAATGCACAGAGGGAAACAGCTGCAAGAAGACGCTAG 663 0.4434 MGKHSTLKGIINMELTLLFSAGYRLVFLTLTLLTFFSLYLYPYHTLVMARMPLEPLIVGRVIGEVLDSFTTSMKMTVSYNKKQVYNGHELFPSSVNTKPKVQIEGADMRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGKELVSYEIPKPNIGIHRFVFVLFKQKRRQCVTPPTSRDHFNTRNFAAQNDLGLPVAAVYFNAQRETAARRR* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1960 220 CDD PEBP_euk 73 211 IPR035810 -
Pvu1g1960 220 Gene3D - 48 220 IPR036610 -
Pvu1g1960 220 SUPERFAMILY PEBP-like 60 214 IPR036610 -
Pvu1g1960 220 PANTHER PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN 50 219 IPR035810 -
Pvu1g1960 220 PANTHER PROTEIN TERMINAL FLOWER 1 50 219 IPR031114 GO:0003712|GO:0009910
Pvu1g1960 220 ProSitePatterns Phosphatidylethanolamine-binding protein family signature. 112 134 IPR001858 -
Pvu1g1960 220 Pfam Phosphatidylethanolamine-binding protein 95 209 IPR008914 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1960 Pvu-Chr1 45561512 45563326 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1960 K06910 - pvu:PHAVU_001G189200g 437.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1960 1 45561512 45563326 Pvu1g1960 1 45561512 45563326 ECH
Pvu1g1960 1 45561512 45563326 Pvu7g2358 7 46932024 46933178 PCT