Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1958 ATGTTGGTGCAAAGGATGTGCATGCTAGGGTTCCTGCTAATCGTCGGAATCTTCCAAATCGATGTCGTTTATGGTTACAATCGACCACCACCTCGTAAAAACCTCGTTATTCCGAACTCCGGTCAGAACTCCCAGTCGCCACAACAGGTACACATATCTGCAGTTGGGCAAAACATGATGAGGATATCGTGGATCACAGATAGCCCAGCTTCAGCAAAAGTCTCGTATGGTCCATCTCCTTCAGCAAATGCATCATCTGCCACCGGGACTACCTCTTCCTACCGTTTTCTGTTGTACAACTCCGGTTCAATTCATGAAGTCGTAATCGGTCCCCTCAACCCCAACACTGTCTACAACTACAATTTGGGTGACCCACCTTTTTCTCAAACATACAACTTCAAGACTCCACCTTCTCAATTTCCCATCAAGTTTGCAGTAGTTGGAGATCTTGGACAAACGGATTGGACGAAGTCGACATTGGACCATGTGGCTAAGTCAAACTACGACATGTTGATTCTACCCGGTGACCTAGCCTACGCAGACTTTATTCAAAATCTGTGGGACTCCTTTGGTCGATTGGTAGAACCATTAGCCAGCCAGCGTCCTTGGATGGTCACCCAAGGCAACCACGAAGTGGAGAAGCTTCCTCTCATTCACGGAACGCCATTCACAGCATACAACGCCAGATGGCACATGCCCTTCGAAGAAAGTGGATCAACCTCTAACCTTTACTATTCTTTCGATGTGGCTGGCGTTCATGTCATCATGCTTGGCTCCTACGCCCCGTTTGACTCCTCTTCTCCGCAATTCAATTGGCTTAAAACTGACTTGCAAAAGGTTAACAGGACAAACACTCCCTGGGTTGTGGTGCTCATTCACGCCCCTTGGTACAGCTCCAACACTGCTCATCAGGGTGAGTTTGAATCCACTGGAATGAAAGCTTCCATGGAAGACTTGCTCTTCCAAGCCCGGGTTGATGTTGTTTTTGCAGGCCATGTTCATGCTTATGAACGCTTTACAAGGGTTTATAAAGACAAAGCTGATAATTGTGGTCCAGTGCATATCACAATCGGAGACGGGGGTAACCGTGAAGGCCTTGCTTCCAAGTACATAGATCCTAAGCCAGATATATCAATGTTCAGGGAGGCTAGCTTTGGACATGGTACACTGGAAATAGTGAATGCATCTCATGCACAGTGGACCTGGCATCAGAACGATAACGATGAAGCGGTTGTTAGTGATTCTATGTGGCTTACTAGTTTCTCCTCCAATCCTTCTTGTAAACAGTGA 1290 0.469 MLVQRMCMLGFLLIVGIFQIDVVYGYNRPPPRKNLVIPNSGQNSQSPQQVHISAVGQNMMRISWITDSPASAKVSYGPSPSANASSATGTTSSYRFLLYNSGSIHEVVIGPLNPNTVYNYNLGDPPFSQTYNFKTPPSQFPIKFAVVGDLGQTDWTKSTLDHVAKSNYDMLILPGDLAYADFIQNLWDSFGRLVEPLASQRPWMVTQGNHEVEKLPLIHGTPFTAYNARWHMPFEESGSTSNLYYSFDVAGVHVIMLGSYAPFDSSSPQFNWLKTDLQKVNRTNTPWVVVLIHAPWYSSNTAHQGEFESTGMKASMEDLLFQARVDVVFAGHVHAYERFTRVYKDKADNCGPVHITIGDGGNREGLASKYIDPKPDISMFREASFGHGTLEIVNASHAQWTWHQNDNDEAVVSDSMWLTSFSSNPSCKQ* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1958 429 CDD MPP_PAPs 138 420 IPR041792 -
Pvu1g1958 429 SUPERFAMILY Purple acid phosphatase, N-terminal domain 40 137 IPR008963 GO:0003993|GO:0046872
Pvu1g1958 429 PANTHER PURPLE ACID PHOSPHATASE 12 427 - -
Pvu1g1958 429 Pfam Purple acid Phosphatase, N-terminal domain 47 135 IPR015914 GO:0003993|GO:0046872
Pvu1g1958 429 SUPERFAMILY Metallo-dependent phosphatases 141 408 IPR029052 -
Pvu1g1958 429 PANTHER ACID PHOSPHATASE RELATED 12 427 IPR039331 GO:0003993
Pvu1g1958 429 Pfam Iron/zinc purple acid phosphatase-like protein C 351 411 IPR025733 -
Pvu1g1958 429 Gene3D - 46 138 - -
Pvu1g1958 429 Gene3D - 139 427 IPR029052 -
Pvu1g1958 429 Pfam Calcineurin-like phosphoesterase 143 336 IPR004843 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1958 Pvu-Chr1 45542395 45546302 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1958 47 390 Miscellaneous Gene Families AT2G03450 25.604 1.55e-29 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1958 K22390 - gmx:100794764 720.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1958 1 45542395 45546302 Pvu1g1958 1 45542395 45546302 ECH