Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1957 ATGTGTGTAAATTCCGCAACCCCATTATATGATTGGCCCTCCCAACTCAAAAGGGTTCCCTTCATTTCCATCAACAAACTTCATGAATCAACAAGAGCAACCCAAAACCAGAAGAACATGATGAGGAAATGCAGAAGCTCTCTTATGGAGTTCCCAATACTCATACACACCCTATGCCTCCTTTTCTTCGCACAGTCCCTACTTTCTGAAGACAACAATTTCGTTCGTCAGCCAGCTGGTCAACTCATCATCACACCCCACCATGGCTCCCATTCTGATCCTCAACAGGTGCACATTTCATTGGTGGGGAAAGAGAAGATGAGGGTTTCGTGGATAACGGAGGAGAAGCATGCAGAATCCGTGGTGGAGTACGGAACAGAAGCAGGGAAGTATAGCGCAAAATCAACGGGGGAGCACACCTCGTACCGATATTTTTTGTACAATTCCGGCAAGATTCACAACGTTGTTATTGGTCCTTTGAAACCAGGCACCACTTACTTCTACAGGTGTGGAGGCTCAGGCCAAGAGTTTTCTCTCAATACACCTCCACCCAACTTCCCTATTGAATTTGTCGTCGTTGGGGACTTGGGACAAACTGAATGGACAGCATCAACCTTGAAACATGTTGAAAGTAGGGAGTACGACGTGGCATTGTTACCAGGAGATCTATCCTATGCAGACTCCCAACAACCTCTGTGGGACTCCTTCGGTCGTTTAGTGGAACCCTATGCTAGTAAAAGGCCATGGATGGTTACTGAAGGCAACCACGAGATTGAGATTTTCCCCATTATTTACCCACAACCCTTCCAACCCTACAATGCTCGTTGGCCTATGCCCTTCCAACAAAGTGCTTCCACCTCAAACCTCTATTACTCCTTTCAGCTTGTCGCTACCCATGTCATCATGCTAGCTTCCTACACCGACTTTCACTCCCAATCACAGCAATACACATGGCTTCAATCTGATCTCGCCAACATTGACAGGGTCAAGACACCTTGGGTCATTGTGGTGTTGCATGCACCTTGGTATAACACAAATGAGGCACACCAAGGTGAAGGAGAATCCATGAGACAATCCATGGAAGGGTTGCTTTATAAGGCCCGTGTTGACTTGGTTTTTGCTGGTCATGTTCATGCATATGAACGCTTCACTCGAATTTACGATAATAAGATTGACTCATGTGGACCCATGTACGTGACCATTGGAGATGGAGGAAATCGAGAGGGACTTGCGTTAATGTTTAAGAACCCTCCAAGTCCGCTCTCGTTGTATCGAGAACCAAGCTTCGGACATGGAAGGTTGAGAATACTAAATGAAACACATGCACATTGGTCGTGGCACCGAAACAACGACACTGATGCAGTTGTAGCTGATGAAGTTTGGATAGAGACTTTAAGCAGTTCCAAAGCATGTTGGAATCAACAAGATGCTCCCAACGAAGAGCTATAA 1449 0.461 MCVNSATPLYDWPSQLKRVPFISINKLHESTRATQNQKNMMRKCRSSLMEFPILIHTLCLLFFAQSLLSEDNNFVRQPAGQLIITPHHGSHSDPQQVHISLVGKEKMRVSWITEEKHAESVVEYGTEAGKYSAKSTGEHTSYRYFLYNSGKIHNVVIGPLKPGTTYFYRCGGSGQEFSLNTPPPNFPIEFVVVGDLGQTEWTASTLKHVESREYDVALLPGDLSYADSQQPLWDSFGRLVEPYASKRPWMVTEGNHEIEIFPIIYPQPFQPYNARWPMPFQQSASTSNLYYSFQLVATHVIMLASYTDFHSQSQQYTWLQSDLANIDRVKTPWVIVVLHAPWYNTNEAHQGEGESMRQSMEGLLYKARVDLVFAGHVHAYERFTRIYDNKIDSCGPMYVTIGDGGNREGLALMFKNPPSPLSLYREPSFGHGRLRILNETHAHWSWHRNNDTDAVVADEVWIETLSSSKACWNQQDAPNEEL* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1957 482 Pfam Purple acid Phosphatase, N-terminal domain 94 178 IPR015914 GO:0003993|GO:0046872
Pvu1g1957 482 Pfam Calcineurin-like phosphoesterase 190 380 IPR004843 GO:0016787
Pvu1g1957 482 PANTHER ACID PHOSPHATASE RELATED 30 475 IPR039331 GO:0003993
Pvu1g1957 482 CDD MPP_PAPs 184 462 IPR041792 -
Pvu1g1957 482 SUPERFAMILY Metallo-dependent phosphatases 187 457 IPR029052 -
Pvu1g1957 482 PANTHER PURPLE ACID PHOSPHATASE 30 475 - -
Pvu1g1957 482 Gene3D - 93 184 - -
Pvu1g1957 482 Pfam Iron/zinc purple acid phosphatase-like protein C 395 458 IPR025733 -
Pvu1g1957 482 Gene3D - 185 472 IPR029052 -
Pvu1g1957 482 SUPERFAMILY Purple acid phosphatase, N-terminal domain 85 183 IPR008963 GO:0003993|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1957 Pvu-Chr1 45532820 45536557 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1957 94 480 Miscellaneous Gene Families AT2G03450 27.137 3.26e-30 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1957 K22390 - gmx:100819446 842.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1957 1 45532820 45536557 Pvu1g1957 1 45532820 45536557 ECH