Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1945 ATGGCATCGGCACTTGCGGGGGATGATTTGGCGGTATCGGCCAGCAGTCGCCGGAGCTGGACGACGTCCAGCTTCAGGGAGGCGTGGACGGCGACGCCCGACGTGTTTAACGTGAGTGGTCGCCACACGCACGAGGATGAAGAGGAAGAGCTCAAATGGGCCGCCATAGAACGCTTGCCAACTTTTGAACGGATGAGAAAAGGGGTGCTCAAGCACGTGCTCGACGATGGACACGTGGTGCTTGATGAAGTCGATGTTTCCAACCTTTGCTTACCCGACAGGAAGCTCTTGATGGACAGCATACTCAAGATTGTTGAGGAAGATAATGAGAAATTTCTACGCAGACTTAGAGATAGAGTCGACAGAGTGGGGATTGAAATTCCGAAGATTGAAGTTCGGTGCGAGAATTTATCTGTGGAGGGTGATGTGCATGTTGGGAGTAGAGCTCTCCCTTCCCTGCTTAATGTTACTCTCAATGCTTTTGAGAGTGTTCTGGGATTATTTCACCTTGCACCGTCCAGGAAGAGGGAAATTCAGATTCTTAAAGATGTTAGTGGGATCGTTAAACCGTCAAGGATGACTCTTCTTTTGGGACCTCCAAGTTCTGGAAAAACATCATTGCTTTTGGCACTTGCAGGGAAACTTGATCGTGATTTAAGGGTGTCTGGGAGAATCACTTACTGTGGGCATGAGCTAAATGAATTTGTTCCACAAAAAACCTGTGCATATATTAGTCAACACGACATTCACTATGGAGAAATGACAGTGAGGGAGACATTAGATTTTTCAGGACGTTGTCTAGGTATTGGCACAAGGTATGAAGCGTTGGTGGAACTCTCAAGAAGGGAGAGAGAAGCAGGAATAAAACCAGACCCTGAGATTGACGCATTCATGAAGGCTATAGCATTATCAGGTCAAAAAACCAATTTGGTAACAGATTATGTTCTCAAGATACTTGGGTTGGATATTTGTGCTGACATTATGGTTGGAGATGATATGAGAAGAGGCATATCTGGTGGACAGAAGAAGCGAGTAACAACAGGGGAGATGCTGGTAGGACCAGCAAAGGCACTATTTATGGATGAAATATCAACAGGATTAGATAGTTCCACCACCTTCCAGATATGCAAGTTCATGAGGCAAATGGTTCATATAATGGATGTAACCATGGTGATTTCTCTTCTACAACCAGCACCCGAGACCTTTGAACTCTTTGATGACATTATCCTACTTTCAGAAGGTCAAATAGTGTACCAAGGTCCACGTGACAATGTGCTAGAGTTCTTTGAACACACGGGTTTCAAGTGTCCTGAGCGAAAAGGAATTGCTGATTTTTTACAAGAAGTGACATCCAAGAAAGACCAGCAACAATATTGGTCAAGAAAAGATGAACCTTACAGATATGTTTCCGTTCCTGAATTTGTACAAGCTTTTAGTTCCTTTGACATAGGAGAGAAACTTGCTACTGAGCTTGGGGTTCCTTACGATAAGAGCCGAGCCCACCCTGCTGCCTTAGTGAAAGACAAATATGGTATAACAAACTGGGAGCTATTGAAGGCATGCTTTTCAAGAGAATGGCTACTTATGAAGCGCAGTGCTTTTGTTTATATATTCAAGACATCACAGATAACAATCATGGCTGTTATTACATTTACTATGTTCCTTAAAACAGAAATGCCAGTTGGAACAGTTCAAGATGGACAAAAATTCTATGGAGCATTATTCTTTAGTCTAGTAAACGTGATGTTTAATGGGATGGCAGAACTATCTATGACTGTTTTTAAGCTTCCTGTCTTTTACAAACAAAGGGATTTCAAGTTCTACCCTGCATGGGCATTTGGTTTGCCTATTTGGCTTCTCAAGATCCCTCTGTCCATTTTGGAATCAGGGATATGGATTATCGTTACATATTACACAATTGGATTTGCTCCTTCTGCTAGCAGATTTTTCCGACAATTCATGGCATTTTTTTGCATTCATCAGATGGCTCTCTCTCTATTTCGGTTTCTTGCCGCAGCTGGTAGAACACTAGTTGTTGCTAATACACTGGGTACCTTGGCCCTGCAATTGATATTTGTGCTTGGAGGTTTTGTTATTGCCAGAAATGACATTGAGCCATGGATGATATGGGGCTATTATTTATCTCCTATGATGTATGGTCAGAATGCCATAGTAATGAATGAATTCCTAGATGAAAGATGGAGTAAACCAAATACAGACTCTAGAATTAATGAACCTACAGTTGGAAAGGCGCTTCTGAAATCTAGAGGCTTCTATACAGAAGAATATTGGTTTTGGATCTGCATTGGAGCCTTGCTGGGGTTTTCTATTATCTTCAACATCTTATTCATTCTTTCTTTAACTTATTTGGATACTTTTAGAGATTCAAAAGGAGTCAATTTGGATGAAGGTGACGAAAAGAATACAAAGTCATCCTCTAGACAGCATATTGAAGGTACAGGCATGGCAATGGAAAGTTCTTCAGAAATTGCTACTTCTTCGAACCAAGAACCAAGAAGAGGAATGGTTCTACCTTTCCAACCTCTTTCACTCGCATTCGACCATATTAGCTACTACGTAGATATGCCTGCAGAAATGAAGAGTCGAGGAATCAAAAGTGATCGACTTCAACTACTACAAGATGTTAGTGGTATTTTTAGACCAGGCATATTGACAGCACTTGTGGGTGTTAGTGGTGCCGGGAAGACAACCCTTATGGATGTATTAGCCGGAAGAAAAACAGGTGGATACATCGAAGGAAATATTAGCATCTCAGGTTACCCAAAGAACCAATCAACATTTGCTCGTGTCAGTGGTTATTGTGAACAGAATGATATTCATTCTCCACATGTTACTGTATATGAATCACTCATATTTTCAGCATGGCTTCGCCTCTCTTCAGATGTAAATGAACAAACACGAAAGATGTTTGTTGAAGAAGTTATGGAATTGGTTGAGCTTAACCCAATCAGAGATGCACTTGTGGGTCTTCCAGGAGTGGATGGTCTATCAACAGAACAAAGGAAAAGGCTTACCATTGCTGTAGAACTGGTTTCCAACCCTTCAATTATCTTCATGGATGAACCAACATCTGGCCTTGACGCCAGAGCTGCTGCTATTGTTATGCGAACTGTGAGAAATACAGTAGACACAGGGAGAACCGTTGTGTGCACAATTCATCAACCAAGTATAGACATTTTTGAAGCTTTTGATGAGCTTTTGTTGATGAAAAGAGGAGGACAGGTTATCTATGCCGGACCTCTTGGTCGCCACTCACATAAGCTAGTAGAATATTTTGAAGCTGTCCCAGGGGTTCCAAAAATCAAGAATGGTTATAATCCTGCCACGTGGATGCTTGATATCAGCTCTACTTTAGTTGAGGCTAATCTTGAGGTAGATTTTGCAGAGATTTATGCTAAGTCTACCCTTTACCGGAGGAACGAGGAGCTTATTCAGGAGCTCAGTACTCCATCACCAGATTCCAAGGACTTATACTTTCCAACCAAGTACTCCCAATCGTTTTTTGTTCAGTGCAAAGCTAACTTCTGGAAACAATATTGGTCCTACTGGAGATATCCTCAGTATAATGTTGTCCGATTCCTCATGACAATAGTCGAGGGAATAATGTTCGGTGCCATTTTCTGGAATAAAGCCCATAAAACCCATAAACAACAAGATTTGGGGAATCTTTTGGGAGCCATGTACGCGGCTGTATTCTTTATGGGAGCCATGAATGCTTCATCAGTACAACCAGTTGTAGCCATTGAAAGAACGATCTTCTATCGTGAAAGAGCAGCAGGGATGTACTCTGCATTGCCATATGCATTTGGGCAGGTGGCAATAGAGGCAATTTATAATGCAATTCAAACAGCCATTTACGCTCTTATGCTTTTCTCAACGATTGGGTTTGATTGGAAGGCAACAAGCTTCTTTTGGTTCTACTACTACATATTCATGAGCTTCATGTACTTCACATTGTATGGGATGATGATTGTAGCACTAACACCGGGTCACCAAGTGGCTGCCATTTGTATGTCCTTCTTCTTGAGTTTCTGGAACTTGTTCTCTGGCTTTATCATTCCTAGGATGCAAATTCCTATTTGGTGGAGATGGTATTATTGGGCTTCTCCTGTTTCATGGACACTGTATGGCCTTATTACCTCACAACTAGGTGACAGAAATGTAGAATTGGAGATACCAGGTAATGGAACCATGCAACTGAAGGAATTCCTGAAACAAAACTTTGGTTTTGAGTATGACTTCCTTCCAGTTGTTGCTGCTGTTCATGTAGGCTGGGTCATCCTCTTCTTATTCGTTTTTGCCTATGGCATCAAATTTCTTAATTTCCAAAAGAGGTAG 4359 0.418 MASALAGDDLAVSASSRRSWTTSSFREAWTATPDVFNVSGRHTHEDEEEELKWAAIERLPTFERMRKGVLKHVLDDGHVVLDEVDVSNLCLPDRKLLMDSILKIVEEDNEKFLRRLRDRVDRVGIEIPKIEVRCENLSVEGDVHVGSRALPSLLNVTLNAFESVLGLFHLAPSRKREIQILKDVSGIVKPSRMTLLLGPPSSGKTSLLLALAGKLDRDLRVSGRITYCGHELNEFVPQKTCAYISQHDIHYGEMTVRETLDFSGRCLGIGTRYEALVELSRREREAGIKPDPEIDAFMKAIALSGQKTNLVTDYVLKILGLDICADIMVGDDMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQICKFMRQMVHIMDVTMVISLLQPAPETFELFDDIILLSEGQIVYQGPRDNVLEFFEHTGFKCPERKGIADFLQEVTSKKDQQQYWSRKDEPYRYVSVPEFVQAFSSFDIGEKLATELGVPYDKSRAHPAALVKDKYGITNWELLKACFSREWLLMKRSAFVYIFKTSQITIMAVITFTMFLKTEMPVGTVQDGQKFYGALFFSLVNVMFNGMAELSMTVFKLPVFYKQRDFKFYPAWAFGLPIWLLKIPLSILESGIWIIVTYYTIGFAPSASRFFRQFMAFFCIHQMALSLFRFLAAAGRTLVVANTLGTLALQLIFVLGGFVIARNDIEPWMIWGYYLSPMMYGQNAIVMNEFLDERWSKPNTDSRINEPTVGKALLKSRGFYTEEYWFWICIGALLGFSIIFNILFILSLTYLDTFRDSKGVNLDEGDEKNTKSSSRQHIEGTGMAMESSSEIATSSNQEPRRGMVLPFQPLSLAFDHISYYVDMPAEMKSRGIKSDRLQLLQDVSGIFRPGILTALVGVSGAGKTTLMDVLAGRKTGGYIEGNISISGYPKNQSTFARVSGYCEQNDIHSPHVTVYESLIFSAWLRLSSDVNEQTRKMFVEEVMELVELNPIRDALVGLPGVDGLSTEQRKRLTIAVELVSNPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGPLGRHSHKLVEYFEAVPGVPKIKNGYNPATWMLDISSTLVEANLEVDFAEIYAKSTLYRRNEELIQELSTPSPDSKDLYFPTKYSQSFFVQCKANFWKQYWSYWRYPQYNVVRFLMTIVEGIMFGAIFWNKAHKTHKQQDLGNLLGAMYAAVFFMGAMNASSVQPVVAIERTIFYRERAAGMYSALPYAFGQVAIEAIYNAIQTAIYALMLFSTIGFDWKATSFFWFYYYIFMSFMYFTLYGMMIVALTPGHQVAAICMSFFLSFWNLFSGFIIPRMQIPIWWRWYYWASPVSWTLYGLITSQLGDRNVELEIPGNGTMQLKEFLKQNFGFEYDFLPVVAAVHVGWVILFLFVFAYGIKFLNFQKR* 1453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1945 1452 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 851 1103 IPR003439 GO:0005524
Pvu1g1945 1452 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 176 438 IPR027417 -
Pvu1g1945 1452 CDD ABCG_PDR_domain2 848 1086 IPR034003 -
Pvu1g1945 1452 MobiDBLite consensus disorder prediction 801 837 - -
Pvu1g1945 1452 Pfam Plant PDR ABC transporter associated 734 797 IPR013581 -
Pvu1g1945 1452 Pfam ABC-2 type transporter 517 729 IPR013525 GO:0016020|GO:0140359
Pvu1g1945 1452 Pfam ABC-2 type transporter 1177 1389 IPR013525 GO:0016020|GO:0140359
Pvu1g1945 1452 Pfam ABC transporter 879 1031 IPR003439 GO:0005524
Pvu1g1945 1452 Pfam ABC transporter 181 363 IPR003439 GO:0005524
Pvu1g1945 1452 MobiDBLite consensus disorder prediction 814 837 - -
Pvu1g1945 1452 CDD ABCG_PDR_domain1 170 420 IPR034001 -
Pvu1g1945 1452 Pfam ABC-transporter N-terminal 106 156 IPR029481 -
Pvu1g1945 1452 Gene3D - 865 1099 IPR027417 -
Pvu1g1945 1452 PANTHER ABC TRANSPORTER G FAMILY MEMBER 34-RELATED 21 1452 - -
Pvu1g1945 1452 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 874 1088 IPR027417 -
Pvu1g1945 1452 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 165 438 IPR003439 GO:0005524
Pvu1g1945 1452 SMART AAA_5 888 1080 IPR003593 -
Pvu1g1945 1452 SMART AAA_5 190 415 IPR003593 -
Pvu1g1945 1452 Pfam ABC-2 type transporter 396 463 IPR043926 GO:0140359
Pvu1g1945 1452 Pfam ABC-2 type transporter 1060 1133 IPR043926 GO:0140359
Pvu1g1945 1452 Gene3D - 168 469 IPR027417 -
Pvu1g1945 1452 PANTHER ATP-BINDING CASSETTE TRANSPORTER 21 1452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1945 Pvu-Chr1 45429817 45437391 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1945 K08711 - gmx:100786482 2630.51