Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1934 ATGATACTGCCAACTGTGATGTTCAACATGTTGGGAACTCATCAGCCTCGGTTTATGGTGCTTCTATTTCTGTCCATCCAGATTCTCACGTTGAGATGCACTTCCATCACGCAAGAGCTTCACACGGGCTTCTCCGCGACACCAGAGCCTTCAACGCCGTCGTTTCAGCCACTTCTGAGTGACCCCACCGGAAACTTCTCTCTGGGCTTCCTCCGCGTGAACGGAAACCAGCTGGCACTAGCCATCCTCCACGTCGCATCCTCGGAGCCTTTCTGGGTGGCCAACCCAACTCGCGCAGCGTCCTGGTTCGATACCACACGCCTCTTCTTCAACGGTAGTCTCGTGTTGTCGGACCCCGAAACGCGCGTTTCGTGGTCAACCGCTACAAACGGAGACCGCGCGGTGCTCCTCAACACCTCCAACTTGCAAGTCCAAACCAAAGGCAGTCCCCTCTGGGAAAGTTTTGAGTTTCCCACAAATACCATCGTCCAGGGCCAGAACTTCACCTCCAAAATGTCTTTGTTATCTTCCAACGGATTATATTCATTGCGGTTAGGCAACGATTACATGGGACTATACGAAGGAAACAAGTATTTATATTGGAAACGCACGGTACTGGAGACGAAAGCGGAAGTGCAGGAAGGGAAGGGACCGATTTACGCCCGAGTCAACCCGGAGGGTTACCTCGGGATGTATCAGACAAACGACGAGAAGCCCGCGGATGTTCAAAAGTTCAACAGCTTCCAACAGGCTGTCACAGCGGCGTCGTTTTTGTTCATGCGGATGGAAGCGGACGGGAATTTGAAAGCTTATTACTGGGACGGTTCCAACTGGCTAACTAACTACCAAGCTATTTCTGAGACCTGCGAACTCCCCCGCTCCTGCGGTTCCTACGGCTTGTGCAGGCCCGGCGGGTCTGGATGCTCCTGTTTAGATAACCGAACCCGGTTCGAAGCGGGTGGGTGCTTCAACGATGTTGGTGGAGAGTTGTGTGGGGAAGAAGGAATTGGTAGGAGTAAAAGCGATTACTGGGTGCTGAGAAGGAGCGGCGTGGAGCCACCGCATAAGGAGCTCCTTAGGCACGTGACTACGCCGTCTTTGGCGGAATGCGAGCAGTTGTGTGAGAAGAACTGTAGCTGTTGGGGAGCGGTGTATAACAATGGGACCGGGTTCTGCTACATGTTGGAGAATCCGATCGAAAGCATGTTGGGTAGCGGAGATGAGTCAAAAGTGGGGTATTTCAAAGTTAAAAAAGGGGATCGAGAAAAGAATCGGGTTTGGGTACGGGTTGGAATTGTGATAACGGTTTTGGGAATGGTTGGGGTTATTATTGTTGGGATGTGGTTTTGTGTGAGGAGATGGAAAAGGAGAAGAGTAGTGAAGGAAGAGGATTGGGCCTCGCCCGGCCCGTATAAGAATCTTGGATCTGCAAGTTTTAGATCCATCGAAATGAGCAACAGTGTGGAGTGA 1470 0.5177 MILPTVMFNMLGTHQPRFMVLLFLSIQILTLRCTSITQELHTGFSATPEPSTPSFQPLLSDPTGNFSLGFLRVNGNQLALAILHVASSEPFWVANPTRAASWFDTTRLFFNGSLVLSDPETRVSWSTATNGDRAVLLNTSNLQVQTKGSPLWESFEFPTNTIVQGQNFTSKMSLLSSNGLYSLRLGNDYMGLYEGNKYLYWKRTVLETKAEVQEGKGPIYARVNPEGYLGMYQTNDEKPADVQKFNSFQQAVTAASFLFMRMEADGNLKAYYWDGSNWLTNYQAISETCELPRSCGSYGLCRPGGSGCSCLDNRTRFEAGGCFNDVGGELCGEEGIGRSKSDYWVLRRSGVEPPHKELLRHVTTPSLAECEQLCEKNCSCWGAVYNNGTGFCYMLENPIESMLGSGDESKVGYFKVKKGDREKNRVWVRVGIVITVLGMVGVIIVGMWFCVRRWKRRRVVKEEDWASPGPYKNLGSASFRSIEMSNSVE* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1934 489 Pfam S-locus glycoprotein domain 253 312 IPR000858 GO:0048544
Pvu1g1934 489 PANTHER OS11G0149900 PROTEIN 49 476 - -
Pvu1g1934 489 Pfam D-mannose binding lectin 91 172 IPR001480 -
Pvu1g1934 489 SUPERFAMILY alpha-D-mannose-specific plant lectins 89 202 IPR036426 -
Pvu1g1934 489 Gene3D - 56 185 - -
Pvu1g1934 489 ProSiteProfiles PAN/Apple domain profile. 331 418 IPR003609 -
Pvu1g1934 489 SMART blect_4 37 158 IPR001480 -
Pvu1g1934 489 PANTHER - 49 476 - -
Pvu1g1934 489 PIRSF SLG 9 430 IPR035446 -
Pvu1g1934 489 Pfam PAN domain 362 396 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1934 Pvu-Chr1 45214524 45216497 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1934 - - gmx:100812159 723.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1934 1 45214524 45216497 Pvu1g1934 1 45214524 45216497 ECH