Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1931 ATGGAGATTCCGGAATCAGACAGAAGGAAGCTTCAACAGCAGCCTCCTGGGTTCCCAATCCCCACCACCCCTTTCAACCCCATCGCTCCGATGCCAGTTCCGATCTGGACTCCTGAGATGGGAAACCACTTGTATTCTCATTTCAATGGGATACCTGCAGGTTTTCACGTCTCACCATATCCAGACATAAACAACTGGCCTTTCCACCGCTCAGAGCCTGCCGTTTTTCCCCATCACAATGCCCAAACCGCCCCACAGATATCTTTTGAGGCCTTTCCCAGTTCAAGTAACGGCATTGCTGAACTTTTCGCTCAGACAGACATCCCATTCGCATATTCTAATGTTACGAATGAAGAGCTTCTGAGCCAGTTTATTCCTCCGTATAATCTACAGTGCAACCCGAGCTATGCATCTTTTGATCATCATCAACTCTCTCTGGAGCAACCGCTTGCCAATACTATCCATAACCAGTATCAAGGTCTTCTGGGTTCATCATACTTTGATTACTGTGGCAAGACGTTTCCTCAAATTGCACCACACAAAGATGATGCCGTTGCAGCAGAACCCAGAATAGATGCAGCGACACCAACAGAGAGGAACCACCAGAGAGAAGATAAAAATGCACGAGCCATATATGACCTGAATAGAGAAACTGCTGCTTCATCTGCACCACGCAAGGAGAATTACAACCATAAAATGGAAGTAAGCCTTGATTTTGATCTGAATAAAACACCTCAACCAAAAGCCAGAAGAAGAAAGCACAGGCCCAAGGTCATAAAAGAAGACAAACCAAAACGTGCTACCAAAAAAGTTCAATCGAAAGAGAACCAAACTGACAAGAAAGCAAAAAGGAAAGGATTGAACACAACTTCTACTCCACAAACAGAAGTGACAGGAAAATGGACAACACCATTGACGCCTGAATCAGTCACAAAGACATGTAGAAGGTCCTTGAATTTCGATACCAGGGAACAAGCAAGAGATGGCAATTCCAGACATAAAGAAACCATGCTCTTCGCCAAAGCAAGCAGCTCAAGGAATTGGATGGCTGATTGTAATGGACTTCAAGAGTGTGCACAAATACTATCAAATAACTCCAATAGCAGAGACTGTTTGAGCACAGGATGTGGATTACAAGCTGTTGGTTCAAAGAGAAAACAACCTGGTATTGAACAGGCAGATAACGGCAACATCAATCTGATAGGAGCACAATATAATGCTATGCAAGCATACTGCCTAGACTACGGTGTTCAATTTCCAAATGTTCAGAAGAAAAGGAGAACTGAAAATGGGAGAATTTCGAAGACACCACGTAAATCTTCTGTGACTGACCTAAAAGATGTACGACTGGCAACTTTCGTATCACATCCTTATGTGTCAAGTCACAACAGCTGGTATTCTGGTTCAGAATATAATGCAGCAGGACTCCCAGAAAGAGCTATTCATGATAAACTTCAACCCCTTGAGTGCACCTTGTCTTTAGGGCAGAAGAGGCCGACCAAAAGAAGATCAAAAACTCATGCCGGTCCAGCACATACTAGAAAGCAAACATGTAGCTCTGACAGACGAACATTTGGAGATCCAGAAGGACCACAGACATGCACCGATGCTTTAATTGCAGATTTGCGAGGATCGGTCACAAAAAAGAAACGAACAAAAACTAGAAGAATTCGTGTCCGTTCATCATCTTCCTGCAAAAATGAAAGACAGCACAACACATTAGACAAATGGAAAAACATACGGACTGAGGACGATTTAATAGAGCTATTTAGATTCCTGAACATCGATGGAGAGATGCAGAATATGCTTGTTCCTTATAACCAAAATGGCACCATTGTTCCACACGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAAGAAAAAACGACCTAAAGTTGATCTTGATGGGGAGACTGAGAGAATCTGGAACCTTTTACTTGTCGATATCAACAGTAGTGGGATTGATGGAAGTGATCCCGATACGGTCAAATGGTGGAAAGAAGAACGAGAAGTGTTCCGTGGACGAGCAGACTCATTCATTGCAAGGATGCATCTGGTACAAGGAGACAGGCGCTTTTCGATGTGGAAGGGATCTGTTGTGGATTCTGTTGTCGGAGTTTTCCTCACTCAAAATGTTTCAGACCATCTTTCCAGTTCTGCATTCATGTCCCTCGCTGCTCGATATCCTCTGAAGTCAACCAGTACATTCCAGAAGGAAAGCACATGTTCGATGGTCAATGAACCACAAGTGTGCATTGTGGAGGAGCCAGTAGAAAATGGAAATCGGGATAGGAAAATATTGGATCAATCCATTTGTGAAATGAATTCTAAGACAATGGACATCATCGAAAATTATGAAGAAAGAGAAGGTGTAGACAGCAATGTTTCCTGCAGAACTAATGGCAGCGTAATTTGTGTAGCAGATGAATCAAACAGCAACATGTTGGAATCGGAATCGGCTCAAAGACGTGGCAGTGAACATAGCCCAGTGGAAAGTGGAACAATTAGTGGTATGACTGAGGAAGGGCAAGAAAGTTTATGTCATGTGAGTGTTAGGAAAGAGTTAAATAATGTATTTCCATCCCAATTATCTGGTGCTACATTTCAAACATCAGGAGATTTTTCAATTGATCAAAATACTGAAAAGATAGGATCATTCTCAGATAGCAACTCAGAAATAGAAGACCTGCCAAGCACAGCCCAGTTCAATATTTATCATAGCGGGACTTCATTCAGAGAACTTTTAGAAATGGCAAGTTCAACCATGTTGCATGAAGTTAATAGTCAAAGAGACAAATCAACTGAGAACTTTAGAGACGCATGTGATCAGTCCATAGACTTGAACCATGACAACCAAGTAGGAAACTTGGAAAAATCAGATGTTACTCTTACTCGAGACACTTTTGAAACACCCATCACCAAGGAATATGCTTTGGAAGCAACCCCAAACTCGGGAGTGCTTGAAGTTAACTGCTATGATCCTCTAAAAATAGAAGTCCCATCAAGTGATTCCTCAAAGAATAAAGGTGAGAATGATAAGAGGCATAGTTTTCGAACAGATTCCAACTCCAAAGCTGCATTTGTCAATTCTCATGGACAAACTCAGGATCCCATGCAGAAAGCAAGAGATCAAAAATTTGGTGATCACAAGAATGAAAAGAAGAAAAAAAACAGCAAAAAAAATAGTAAGAAGGAACCTGCCCCAAAGAAAGCTGCCCCAAAAAAAGCTGCCCCAAAGAAAGCTGCCCCAAAAAAGGCTGCCCCAAAAAAAGCTGCCCCAAAAAAACTAAAAAGCGAGAAAGAGGAAAATAACTTTGATTGGGATAGTTTAAGAATACAAGCACAGGCTCGGGCAGGGAAGAGAGAAAAGACCGAAAACACCATGGACTCTGCGGACTGGGATGCTGTAAGACGTGCAGATCTCAGTGAAATTTCCAAAATAATCAGAGAAAGGGGCATGAACAACCTGCTGGCTGATCGTATTAAGGGTTTCCTCAATAGAATGTTTGACAAGCACGGGAGCCTTGATCTGGAGTGGCTGAGAGATGTTCCACCTGACCAAGCAAAAGAATTCTTGCTCAGCATAAAGGGATTGGGATTGAAAAGTGTGGAGTGCGTTCGACTCTTAACACTACACCATCTTGCTTTCCCGGTGGACACAAATGTTGGACGCATAGCAGTACGTTTGGGATGGGTACCTCTCCGGCCACTGCCAGAGTCACTACAGTTGCATCTTCTAGAACTGTACCCAGTGTTGGAGTCTGTACAAAAATATCTCTGGCCTCGACTCTGCAAGCTAGACCAAAGAACATTGTATGAGCTGCATTACCAGCTGATTACATTTGGAAAGGTTTTCTGTACTAAAAAACAACCAAATTGCAATGCATGCCCGATGAGAGGGGAATGCAAACACTTTGCAAGTGCCTTTGCAAGTGCAAGACTTGCCCTGCCAGGACCAGAGGAGAAGAGAATAGTAATCCCGTCCGGAAACAATGCAAACGAGCAGAACCCACCACTAGTTATCAATCAACCGCTCTTGTTTCTCCCTGGGAACACTATTCAAGACGAACTTCAACAAACAAAAGTGATCACACAACCTATTGTAGAAATGCCAGCATCTCCAGAGCCCGAATGCTCCCAACCGTCAGAAATTATGGATATAGAGGACGCCTTCAATGAGGAATCATGTGAAATTCCAACCATAAAACTAGACATAGAAGAGTTCACTTTGAACTTGCAAAACTATATGGAACAAAGCATGGAACTTCAAGAAGGAGAAATGTCAAAGGCCTTGGTTGCTTTACATCCAGATGCTGCACGCATTCCTACACCCAAGCTGAAGTATAAGAGCAACTTGAGAACAGAGCATTACGTTTATGAACTCCCTGATTCACATCCTCTTCTGAATGGGTGGGAACAGCGAGAACCAGATGATCCAGGGAAATATCTTCTAGCTATATGGACCCCAGGGGAGACAGCAGATTCCATACAACCACCAGAAAGAAAATGCAGCTCTCAGGACTGTGGACAGCTTTGTAAAGAAAATGAATGTTTTGCATGCAACAGTGTCCGTGAAGCAAATTCACAAATAGTTCGAGGAACACTCCTGATACCATGCCGAACAGCTATGGGAGGGACCTTTCCGCTAAATGGGACCTATTTTCAAGTCAATGAGGTTTTCGCTGATAATGACTCAAGTATAAACCCAATTAGTGTTCCCCGAAGTTGGATCTGGAACCTTCGTAGGAGAACAGTGTATTTTGGAACCTCCGTAACACACATATTTAGAGACCTATCAACACAAGAAATTCAACAATGCTTCTGGAGAGGATATGTTTGCGTGCGAGGATTTGACAGGGAAAGAAGAGCGCCTCGGCCTCTGTTGGCTAGATTGCACATCCCAATTAGCAAGAAGCCTAAGGATCCTAATGCTCCTAGGAAGCCTAGGAAGCCTAAGGATCCTAATGCTCCTAGGAAGCCTAGGAAGCCTAAGAATCCAAAGAATAAGGACAACACCCAAAAGAAGTCCAAGCCGGCAACACAATCTAAAAAGAAACAAAAACAGCCATAA 5070 0.4294 MEIPESDRRKLQQQPPGFPIPTTPFNPIAPMPVPIWTPEMGNHLYSHFNGIPAGFHVSPYPDINNWPFHRSEPAVFPHHNAQTAPQISFEAFPSSSNGIAELFAQTDIPFAYSNVTNEELLSQFIPPYNLQCNPSYASFDHHQLSLEQPLANTIHNQYQGLLGSSYFDYCGKTFPQIAPHKDDAVAAEPRIDAATPTERNHQREDKNARAIYDLNRETAASSAPRKENYNHKMEVSLDFDLNKTPQPKARRRKHRPKVIKEDKPKRATKKVQSKENQTDKKAKRKGLNTTSTPQTEVTGKWTTPLTPESVTKTCRRSLNFDTREQARDGNSRHKETMLFAKASSSRNWMADCNGLQECAQILSNNSNSRDCLSTGCGLQAVGSKRKQPGIEQADNGNINLIGAQYNAMQAYCLDYGVQFPNVQKKRRTENGRISKTPRKSSVTDLKDVRLATFVSHPYVSSHNSWYSGSEYNAAGLPERAIHDKLQPLECTLSLGQKRPTKRRSKTHAGPAHTRKQTCSSDRRTFGDPEGPQTCTDALIADLRGSVTKKKRTKTRRIRVRSSSSCKNERQHNTLDKWKNIRTEDDLIELFRFLNIDGEMQNMLVPYNQNGTIVPHEEEEEEEEEEKKKRPKVDLDGETERIWNLLLVDINSSGIDGSDPDTVKWWKEEREVFRGRADSFIARMHLVQGDRRFSMWKGSVVDSVVGVFLTQNVSDHLSSSAFMSLAARYPLKSTSTFQKESTCSMVNEPQVCIVEEPVENGNRDRKILDQSICEMNSKTMDIIENYEEREGVDSNVSCRTNGSVICVADESNSNMLESESAQRRGSEHSPVESGTISGMTEEGQESLCHVSVRKELNNVFPSQLSGATFQTSGDFSIDQNTEKIGSFSDSNSEIEDLPSTAQFNIYHSGTSFRELLEMASSTMLHEVNSQRDKSTENFRDACDQSIDLNHDNQVGNLEKSDVTLTRDTFETPITKEYALEATPNSGVLEVNCYDPLKIEVPSSDSSKNKGENDKRHSFRTDSNSKAAFVNSHGQTQDPMQKARDQKFGDHKNEKKKKNSKKNSKKEPAPKKAAPKKAAPKKAAPKKAAPKKAAPKKLKSEKEENNFDWDSLRIQAQARAGKREKTENTMDSADWDAVRRADLSEISKIIRERGMNNLLADRIKGFLNRMFDKHGSLDLEWLRDVPPDQAKEFLLSIKGLGLKSVECVRLLTLHHLAFPVDTNVGRIAVRLGWVPLRPLPESLQLHLLELYPVLESVQKYLWPRLCKLDQRTLYELHYQLITFGKVFCTKKQPNCNACPMRGECKHFASAFASARLALPGPEEKRIVIPSGNNANEQNPPLVINQPLLFLPGNTIQDELQQTKVITQPIVEMPASPEPECSQPSEIMDIEDAFNEESCEIPTIKLDIEEFTLNLQNYMEQSMELQEGEMSKALVALHPDAARIPTPKLKYKSNLRTEHYVYELPDSHPLLNGWEQREPDDPGKYLLAIWTPGETADSIQPPERKCSSQDCGQLCKENECFACNSVREANSQIVRGTLLIPCRTAMGGTFPLNGTYFQVNEVFADNDSSINPISVPRSWIWNLRRRTVYFGTSVTHIFRDLSTQEIQQCFWRGYVCVRGFDRERRAPRPLLARLHIPISKKPKDPNAPRKPRKPKDPNAPRKPRKPKNPKNKDNTQKKSKPATQSKKKQKQP* 1690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1931 1689 MobiDBLite consensus disorder prediction 1634 1651 - -
Pvu1g1931 1689 Gene3D - 1214 1302 IPR023170 -
Pvu1g1931 1689 MobiDBLite consensus disorder prediction 1003 1020 - -
Pvu1g1931 1689 SMART endo3end 1112 1284 IPR003265 GO:0006284
Pvu1g1931 1689 Pfam RRM in Demeter 1533 1633 IPR028925 -
Pvu1g1931 1689 Coils Coil 1405 1425 - -
Pvu1g1931 1689 MobiDBLite consensus disorder prediction 998 1110 - -
Pvu1g1931 1689 MobiDBLite consensus disorder prediction 261 286 - -
Pvu1g1931 1689 MobiDBLite consensus disorder prediction 1631 1689 - -
Pvu1g1931 1689 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 201 1643 IPR044811 GO:0019104|GO:0035514|GO:0080111
Pvu1g1931 1689 MobiDBLite consensus disorder prediction 1073 1091 - -
Pvu1g1931 1689 MobiDBLite consensus disorder prediction 1092 1107 - -
Pvu1g1931 1689 MobiDBLite consensus disorder prediction 1 24 - -
Pvu1g1931 1689 MobiDBLite consensus disorder prediction 191 212 - -
Pvu1g1931 1689 SMART ccc3 1285 1305 IPR003651 GO:0051539
Pvu1g1931 1689 MobiDBLite consensus disorder prediction 493 532 - -
Pvu1g1931 1689 MobiDBLite consensus disorder prediction 814 838 - -
Pvu1g1931 1689 MobiDBLite consensus disorder prediction 1021 1040 - -
Pvu1g1931 1689 CDD ENDO3c 1132 1250 IPR003265 GO:0006284
Pvu1g1931 1689 Gene3D Hypothetical protein; domain 2 1120 1213 - -
Pvu1g1931 1689 MobiDBLite consensus disorder prediction 287 307 - -
Pvu1g1931 1689 Pfam Permuted single zf-CXXC unit 1499 1530 IPR028924 -
Pvu1g1931 1689 MobiDBLite consensus disorder prediction 191 307 - -
Pvu1g1931 1689 SUPERFAMILY DNA-glycosylase 674 1307 IPR011257 GO:0003824|GO:0006281
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1931 Pvu-Chr1 45156940 45167463 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1931 - - pvu:PHAVU_001G186500g 3182.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1931 1 45156940 45167463 Pvu1g1931 1 45156940 45167463 ECH
Pvu1g1931 1 45156940 45167463 Pvu7g2298 7 46315507 46326863 PCT