Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1922 ATGGGGGGTGAAACGGTGAACGGGTCATGGTTCAGTTCTTTTTGGCCAGTCTCTCGCAAGAGTGCATCATCGGATAACAAGGCAGTGGTGGGAATTTTGGCATCAGAAGTTACAGGGTTGATGTTGAAGGTGGTTAATTTATGGCTGTCTTTGAGTGATGGGGAGGTATTGAGTCTAAGGGAAGGGATGGTGAATTCAGTTGGAGTCAAAATGCTGGTGTCTGACAATGATGATTACTTGATGGAACTTGCGTTGAATGAAATACTTGATAACTTTCAATCTCTTGCACGCTCTGTGGCTAGGTTGGGTAAGAAATGCGTTGATCCAGTTTATCATCGTTTTGAACATTTTGTTCATAACCCAGCTCAAAATTATTTTCAATGGTCTGGGTGGGAGTATAGGTGGAAAAAGATGGAGAGGAAAGTGAAGAAAATGGAAAAATTGATTGCTGCTATGACCCAGTTTTGCGAAGAGGTTGAGGTGCTAGCAGAGGTTGAACAGACTTTCCGAAGAATGCAGGCAAATCCGGACTTGCATCGGGTGAAATTGCTTGAGTTTCAGAAGAAGGTCATGTTGCAGCGGCAGGAAGTGAGAAATCTCAGAGACATGTCTCCATGGAATAGAAGTTGTGATTATGTTGTCCGGTTGTTGGCGAGATCACTATTTACTATCCTGGAGAGGATCGTACTTGTCTTTGCAAATACTCACACACAAACTGTACAACCACATAATTATTCTCCGCATATGAACGCTAACAATCTTCTGCGAAGTCATTCATTTTCTGTTATGCATTCATCTGTTTATCCTTCAGAGAATACTCTCAAAGGATTCAATTCAGGTCCTGTTGGAGGGAGGCCAGTATCAAACTCGATCTTTTTAGTAGGCAAGGGCAAAAGAAAGAAGAAACAGCAGCAAGCTCTTCATGAACCTGTTTTATTCAGAAAAAACACATATTCAGAAAGCAAACAGTTAGGACATATTGTGGGCTTCAAAGGTTGTATGTCTGCTGCAAACAGTTCTCCTGTCATACAAAACTGTATGCAGACAAATGGTGGCTCCATGAGGTTGACTGATTGTCATTTGAAATCTATTGATAAAATGAAAATAGTGAATGAGTTATCTCACTCCAACAGAGTTAGAATATACTCTAAATTATCCATCAATAACCAGTTAAAGGCTGCTTCCAAATCCCTTGGTGATGCAGCTCTTGCCCTACATTATGCAAACATGATTGTATTGATTGAGAGGATGGTAACATCACCTCAGCTGGTTGATCTTGCCACAAGAGATGATCTGTACAGCATGCTTCCAACTACTGTAAGAACTGCTCTAAGGGCTAAGCTTAAGAGCCATGCAAAAGGTAAATCTTCCTCCAATCATCATGATGCAAACCTTGCTGCTGAATGGAGTCTGGTACTTGCACAGATATTGGAATGGTTGGCTCCACTGGCACATAACATGATAAGCTGGCATTCTGTGAGAAATTTTGAGAAGGAGTGCTCAACTTTTAACGCAAATGTTTTACTTGTTCAAACTCTTTACTTTGCAAACCAAGCAAAAACTGAGGCTGCTATAGTTGATCTTCTTGTGGGTCTCAACTATGTGTGCAGGATTGATACAAAAGGTGGCACAAGAGATACACTGGATTGTGCTAGCACAAGAACTTTTAATGGTGTTCGTTTGAGAAAGAATGGAATGTACAATGAAATTTTATAG 1716 0.4079 MGGETVNGSWFSSFWPVSRKSASSDNKAVVGILASEVTGLMLKVVNLWLSLSDGEVLSLREGMVNSVGVKMLVSDNDDYLMELALNEILDNFQSLARSVARLGKKCVDPVYHRFEHFVHNPAQNYFQWSGWEYRWKKMERKVKKMEKLIAAMTQFCEEVEVLAEVEQTFRRMQANPDLHRVKLLEFQKKVMLQRQEVRNLRDMSPWNRSCDYVVRLLARSLFTILERIVLVFANTHTQTVQPHNYSPHMNANNLLRSHSFSVMHSSVYPSENTLKGFNSGPVGGRPVSNSIFLVGKGKRKKKQQQALHEPVLFRKNTYSESKQLGHIVGFKGCMSAANSSPVIQNCMQTNGGSMRLTDCHLKSIDKMKIVNELSHSNRVRIYSKLSINNQLKAASKSLGDAALALHYANMIVLIERMVTSPQLVDLATRDDLYSMLPTTVRTALRAKLKSHAKGKSSSNHHDANLAAEWSLVLAQILEWLAPLAHNMISWHSVRNFEKECSTFNANVLLVQTLYFANQAKTEAAIVDLLVGLNYVCRIDTKGGTRDTLDCASTRTFNGVRLRKNGMYNEIL* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1922 571 PANTHER PLANT/T32M21-140 PROTEIN 3 566 - -
Pvu1g1922 571 Pfam Domain of unknown function (DUF3475) 32 88 IPR021864 GO:0045927
Pvu1g1922 571 Pfam Protein of unknown function (DUF668) 398 488 IPR007700 GO:0045927
Pvu1g1922 571 PANTHER BNAC09G50660D PROTEIN 3 566 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1922 Pvu-Chr1 45055828 45058254 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1922 - - gmx:100808409 956.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1922 1 45055828 45058254 Pvu1g1922 1 45055828 45058254 ECH
Pvu1g1922 1 45055828 45058254 Pvu7g2302 7 46395761 46398281 PCT