Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1911 ATGGGTACTGCTACATGGGGTCCAGGGGCATCTTCATCCATCAAGCTCTTTCTGTTCATGGCGCCTCTTGTGCTTGTTGCAGGGCTTGTTTCTGTTTTCGGTCCTAACCCCTCTAGTTGGCTTTTCACTGCAAAGCCATCTGCGTTATTATTCAGCTCTGTTACTTCCTCAACTGGTAGTACAGGTGCTGTGACCACCCCTTCTGAGGTGAAGCAGAGAGAAGGGTTGGTGGTGGTTGCCGTGGATAATCGCGCAGGAGAGAATGTTATCTCTGATGACACTCACTTCAACCTCTCCTCTACCCCTCCATTTTCTGTTCAGGCCATACAAACACCTCAACAACATAACAGGGATGAAGAAACCGTTCCCCAAAATTTGGGCAACCTGAGTTCCGTGAATGAGTCTTATGTAGCAGCAGAGAGGCCAAAACTGCAAAGAAAATTCAGCATCTTAGATAGAACTGAAGCAGGTCTAGTAAAAGCTCGAGCTGCAATTAGAGAAGCAAGAAACGGAAATCAAACGCAAGATGCAGACTACGTTCCTATTGGACCAATGTACATGAATGCCAAAGCATTTCACAGGAGTTTCTTGGAAATGGAGAAACAGTTGAAAGTGTATGTGTACGAGGAAGGGGAGGCTCCAGTTTTTCATAACGGACCCTGCAAGAGCATATACTCGATGGAGGGGAATTTCATCCATGGTATTGAGATGAATGAGAAGTTCAGAACAAGAGATCCTGAGAAAGCACATGTGTTTTTCTTACCTTTTAGTGTGGCAATGTTGGTCCAATTCGTGTATGTACGTGACTCTCATGACTTTGGCCCCATAAAAAAAACTGTCACGGATTACGTCAATGTCATCGCAGGAAGATACCCCTATTGGAACAGAAGCCTTGGAGCTGATCATTTCTATATTGCTTGCCACGATTGGGGGCCAGAGACTTCACGTTCTGTTCCTAATTTGCAAGATAATTCGATACGTGTGTTGTGCAATGCCAACACTTCTGAGGGGTTCAAGCCTTCCAAGGATGTTTCTTTGCCGGAAATCAATCTCCAAAGTGGTTCCATAAACGGTTTGATTGGTGGGCCGTCTGCTTCTAAACGTCCACTCTTGGCCTTCTTTGCTGGTGGGCTTCACGGCCCAATTAGGCCCATTCTTCTTGAACACTGGGAAAACAAGCAGGAGGACATGCAGGTTCACAGGTACCTCCCCAAGGGTGTCTCATACTATGAGATGCTGAGGAAGAGCAGGTTCTGCCTTTGTCCTAGTGGGTACGAGGTAGCAAGTCCCAGAGTAGTGGAGGCAATCTACACAGGGTGTGTCCCAGTTCTCATTTCAGATCACTATGTCCCTCCCTTCAGTGATGTTTTGAATTGGAAGTCCTTTTCCGTTGAGGTTTCGGTTGAGGACATTCCCAAATTGAAGGATATTTTGTTGAGTATTTCTCCAACACAGTATATAAGAATGCAGAGGAGAGTGGTGCAAGTTAGGAGGCACTTTGAGGTGCACTCTCCTCCCAAGAGATTCGATGTCTTTCACATGATCCTTCATTCTGTGTGGCTTAGAAGATTGAACTTTAAAGTCCACCACCATCATCAATCACAACTCTCTTAA 1614 0.4572 MGTATWGPGASSSIKLFLFMAPLVLVAGLVSVFGPNPSSWLFTAKPSALLFSSVTSSTGSTGAVTTPSEVKQREGLVVVAVDNRAGENVISDDTHFNLSSTPPFSVQAIQTPQQHNRDEETVPQNLGNLSSVNESYVAAERPKLQRKFSILDRTEAGLVKARAAIREARNGNQTQDADYVPIGPMYMNAKAFHRSFLEMEKQLKVYVYEEGEAPVFHNGPCKSIYSMEGNFIHGIEMNEKFRTRDPEKAHVFFLPFSVAMLVQFVYVRDSHDFGPIKKTVTDYVNVIAGRYPYWNRSLGADHFYIACHDWGPETSRSVPNLQDNSIRVLCNANTSEGFKPSKDVSLPEINLQSGSINGLIGGPSASKRPLLAFFAGGLHGPIRPILLEHWENKQEDMQVHRYLPKGVSYYEMLRKSRFCLCPSGYEVASPRVVEAIYTGCVPVLISDHYVPPFSDVLNWKSFSVEVSVEDIPKLKDILLSISPTQYIRMQRRVVQVRRHFEVHSPPKRFDVFHMILHSVWLRRLNFKVHHHHQSQLS* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1911 537 Pfam Exostosin family 200 479 IPR040911 -
Pvu1g1911 537 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 102 529 IPR004263 GO:0006486|GO:0016757
Pvu1g1911 537 PANTHER EXOSTOSIN FAMILY PROTEIN 102 529 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1911 Pvu-Chr1 44961212 44964907 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1911 - - gmx:100806278 907.131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1911 1 44961212 44964907 Pvu1g1911 1 44961212 44964907 ECH
Pvu1g1911 1 44961212 44964907 Pvu7g2315 7 46507266 46511053 PCT