Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1908 ATGGAAAGCTCAGCATCAAAGCATGAGGTCCTAAAGCCAGTGATCCTCAAAGCTGGTGTTCCTTTGGCTGTGTCTTTTGCTGGTTTAGTTTATGCTTGTTTCGTGGCAAAGAAAAGCCTCTCTAAAACCTCTTCTTTATCACCAAATGAAGCAAGTTCGGATGAAACCAATTCCCACCACGATCCTTCATATGAAGAAAGTTGTCATAGTCATAGCCTCTCTTGTATGGAAGATGAAGGAAATATGACAACTATGGATGAAAGTGTTTTTGCTGAAAGTTCTCTGATCCATGACATCCCATGTTTAGAAGAAGAGATTAATGGCTTAAGAAGCAGGATTGAGGGTATGCAAATGAAAGAGTTGGCCTTGCGTTTGCAGTTTGATCGTTATTGTGGTTTGAAAGAGCAAGAAGCTGTGGTTGGGGAGATCAGAAACATGTTGTCACTTGAGACTGCTCGTGCTGACTTCTTGGATAGGGAGATTTCATCGATGGAGACACAGAATAGAAGGTTGGAGAGTTTTGTTGCTCAATATCTCAGAGTTGTAGAACAGATAGAGCGTTGGAAATCTGAGAATAGAATGCTTCGGAGGAAGTTTCAGAAGCTAATCAGGAAATCAAAGGCACAAACCCAAGTGGCCAAGGAGCAGGCTTTGAAGATCAAAATGGAAGAAGAAGAAATATTGAGAAGCCGTGATGCCTTGGAAACAAAAGTTGATGTCATAAGTAAACTAGAGGATAAAATGGAAGAGCTGCAGAGGGCTTTGGATCAATTGCAGGATGAAAAGAATGAGCTTATGAAGAAGCTTGATACAGCAGAAAAATCACATGCTTTAAAGATTGAAGCTGGAGATGTAAGTAGGGAAGACTACAAACAGCTTGTGGATGAATTGGAGAAGATCAAGAAGGAACGAGCAGATGAAGCTAAAGAACTTATTTACTTGCGGTGGACCAATGCTTGTTTAAGGCATGATCTAATGAGGCCTCACGATCAACAACAGAATCAAGATAAAACCCATTTAGAATTGGAATTTGGGAGAAATGATGTAGTTATTCATTATGACTCGGAGCATGAACTACACAACTCCCTTTTGGAGCATCATAGTGATCCTTCCCTTGATGAGCATCCCAGTAGCCATGATCACAGTGACAGTGCTTGTTCAAAAAGGACAAAGTTGCTTGAAAGGCTAAAGAGATGGGTGGAAGGTGGTGAAAAGGCTAGAGTTAGGCATTCTGTTTCCAAAGGGACAGATGAACATCTAGTTCCTAGAAGGAAATCATGCTCTAGTGCTTGA 1293 0.4107 MESSASKHEVLKPVILKAGVPLAVSFAGLVYACFVAKKSLSKTSSLSPNEASSDETNSHHDPSYEESCHSHSLSCMEDEGNMTTMDESVFAESSLIHDIPCLEEEINGLRSRIEGMQMKELALRLQFDRYCGLKEQEAVVGEIRNMLSLETARADFLDREISSMETQNRRLESFVAQYLRVVEQIERWKSENRMLRRKFQKLIRKSKAQTQVAKEQALKIKMEEEEILRSRDALETKVDVISKLEDKMEELQRALDQLQDEKNELMKKLDTAEKSHALKIEAGDVSREDYKQLVDELEKIKKERADEAKELIYLRWTNACLRHDLMRPHDQQQNQDKTHLELEFGRNDVVIHYDSEHELHNSLLEHHSDPSLDEHPSSHDHSDSACSKRTKLLERLKRWVEGGEKARVRHSVSKGTDEHLVPRRKSCSSA* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1908 430 Coils Coil 234 275 - -
Pvu1g1908 430 MobiDBLite consensus disorder prediction 366 387 - -
Pvu1g1908 430 MobiDBLite consensus disorder prediction 44 72 - -
Pvu1g1908 430 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 33 - -
Pvu1g1908 430 MobiDBLite consensus disorder prediction 406 424 - -
Pvu1g1908 430 Coils Coil 185 225 - -
Pvu1g1908 430 MobiDBLite consensus disorder prediction 406 430 - -
Pvu1g1908 430 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 1 430 IPR040265 -
Pvu1g1908 430 MobiDBLite consensus disorder prediction 54 72 - -
Pvu1g1908 430 Coils Coil 99 119 - -
Pvu1g1908 430 Coils Coil 287 310 - -
Pvu1g1908 430 PANTHER CHUP1-LIKE PROTEIN 1 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1908 Pvu-Chr1 44933520 44935651 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1908 - - gmx:100805210 691.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1908 1 44933520 44935651 Pvu1g1908 1 44933520 44935651 ECH
Pvu1g1908 1 44933520 44935651 Pvu7g2317 7 46530983 46532642 PCT