Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1906 ATGGGGAGGAATAGCGGAAGAGACCGAAGACGAAGAAGATCGGATGAGTCCGAATCCGAATCTCCGTCCGAGTCCGAATCCGACTCGGACCGACGCCACCGTAGCGGTAGCCACCGGACGCGGCGTGACTCCGACGGCGATAGGAGGAAGAAGAAGTCCTCGAGGAACATCACAGAAGAGGAAATCGCGCAGTACATGGCCAAAAAGGCCCAAACAAAGGCTATGAAAGTCGCGAAAAAGTTGAAAACCAGTACGGTATCGGGCTATTCCAACGATTCGAATCCATTCGGTGACTCCAATCTCAATGAGAAGTTTGTTTGGCGCAAGAAGATTGAACGCGATGTTTCTCAAGGTGTGTCTATTGATACGTTTTCAGTTAAGGCCGAGAAAAAGAGACAGATAGAAAGGATGGCAGAAATTGAAAAAGTGAAAAAGAGAAGAGAGGAAAGGGCACTTGAGAAAGCACGACATGAGGAAGAAATGGCACTCTTAGCTAGAGAACGTGCTCGAGCTGAGTTTCAGGACTGGGAAAAGAAAGAAGAAGAGTTCCATTTTGATCAAAGCAAAGTTAGGTCAGAAATTAGATTGCGTGAAGGGCGTGCCAGACCAATTGATGTTCTAACCAAGCATCTGAACGGATCTGATGATTTGGATATAGAAATAAATGAACCATATATGGTCTTCAAGGGTTTGACTGTAAATGAAATGACTGAGCTACGTGATGACATCAAAATGCATCTGGACCTTGACAGGGCAACACCAACTCATGTAGAATATTGGGAGGCACTCCTTCTGGTGTGTGATTGGGAGCTAGCTGAAGTGCGAAAAAAGGATGCGCTTGATCGAGCTAGGGTGCGTGGAGAAGAACCTCCTTCTGATCTGCTTGCAGAAGAAAGGGGATTGCATTCCAGTGTTGAGCCGGATGTGAAGAGGCTTTTGCTGGGGAAGACACATGCAGAATTGGAGGCTTTACAGGTTCACATTGAATCAGAAATGCGTTCTGGCACAGCAAAGGTGGTTGAGTACTGGGAAGCCATTTTAAAACATCTCCATATTTATAAAGCCAAGGCTTGTTTAAAGGAAATTCATGCTAAATTGCTACGTAAGCATTTGCAAACTCTAGAGAGACCATTGGAGGATGAAGATAAATTGGAGGATGCTAATGCTATGATACCGGAGGAGGAGGAGGAAGATACAGAGGATGATGATATTAAAGTCCGATCTCCAGATGAATCATTTTCACCAGAGTTCATTAGAGAGGAGCAAGAAGCTGAAGATGAGGCTGGATCATTTTCGCCACAACTGTTGCATGGTGATGAAAGTGAGGAGGCTATTGACCCTGAAGAGGATAGAGCCATGCTGGAGCGGAATCGTAAGGCTGTCTTAGAAGAGCAGCAAAGACGAGTTCAGGAAGCAATGGCATCAAAGCCAGCTCCTTCTGAAGATAATTTTGAAATGAAGGCTTTAAAAGCTATGGGGGATATGGAAGATGGAGATGCTGTGTTTGGATCTGGTGCTGAAGTGAACCTGGATTCCCAGGTTTATTGGTGGCATGACAAATACAGGCCTAGGAAGCCGAAGTATTTCAACCGTGTTCACACTGGATACGAGTGGAACAAATATAATCAGACTCACTATGATCATGACAACCCACCTCCAAAGATTGTGCAAGGATACAAATTTAATATTTTCTATCCTGATCTTGTAGACAAGACAAAAGCCCCAACCTACACCATTGAGAAGGATGGCAGCAATGGGGAGACTTGCATTATAAGATTCCATGCTGGGCCACCATACGAAGACATTGCTTTCCGCATCGTAAACAAAGAATGGGAATATTCTCATAAGAAAGGTTTTAAGTGCACATTTGAACGTGGAATTCTGCATGTATACTTTAATTTCAAGCGCCACCGCTACCGCAGATAA 1926 0.4465 MGRNSGRDRRRRRSDESESESPSESESDSDRRHRSGSHRTRRDSDGDRRKKKSSRNITEEEIAQYMAKKAQTKAMKVAKKLKTSTVSGYSNDSNPFGDSNLNEKFVWRKKIERDVSQGVSIDTFSVKAEKKRQIERMAEIEKVKKRREERALEKARHEEEMALLARERARAEFQDWEKKEEEFHFDQSKVRSEIRLREGRARPIDVLTKHLNGSDDLDIEINEPYMVFKGLTVNEMTELRDDIKMHLDLDRATPTHVEYWEALLLVCDWELAEVRKKDALDRARVRGEEPPSDLLAEERGLHSSVEPDVKRLLLGKTHAELEALQVHIESEMRSGTAKVVEYWEAILKHLHIYKAKACLKEIHAKLLRKHLQTLERPLEDEDKLEDANAMIPEEEEEDTEDDDIKVRSPDESFSPEFIREEQEAEDEAGSFSPQLLHGDESEEAIDPEEDRAMLERNRKAVLEEQQRRVQEAMASKPAPSEDNFEMKALKAMGDMEDGDAVFGSGAEVNLDSQVYWWHDKYRPRKPKYFNRVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKTKAPTYTIEKDGSNGETCIIRFHAGPPYEDIAFRIVNKEWEYSHKKGFKCTFERGILHVYFNFKRHRYRR* 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1906 641 PANTHER POLYGLUTAMINE BINDING PROTEIN 1/MARVEL MEMBRANE-ASSOCIATING DOMAIN CONTAINING 3 6 641 - -
Pvu1g1906 641 SMART CactinC_cactus_3 517 641 - -
Pvu1g1906 641 MobiDBLite consensus disorder prediction 1 62 - -
Pvu1g1906 641 PANTHER BNAC05G02180D PROTEIN 6 641 - -
Pvu1g1906 641 MobiDBLite consensus disorder prediction 405 419 - -
Pvu1g1906 641 MobiDBLite consensus disorder prediction 1 58 - -
Pvu1g1906 641 Coils Coil 138 174 - -
Pvu1g1906 641 Pfam Conserved mid region of cactin 166 363 IPR018816 -
Pvu1g1906 641 MobiDBLite consensus disorder prediction 378 449 - -
Pvu1g1906 641 MobiDBLite consensus disorder prediction 386 404 - -
Pvu1g1906 641 Pfam Cactus-binding C-terminus of cactin protein 517 641 IPR019134 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1906 K25058 - gmx:100780087 1101.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1906 1 44910488 44915798 Pvu1g1906 1 44910488 44915798 ECH