Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1903 ATGGATTGTTTGTATGGTGAAAGAAACAAGTTGATGCCAATATCTCTATTAATTCCATTCCATGCATCCAAAAACAAAACCAAATATACCAACTTAGATATAACAAGATCAAAGACCCTTATCCCTCTGCAATTCCAACCACAACAGCGTAGGTATTCCACCGGAAGAAGAGAGGAGAAGGAGGAAAACACCACCAGCTTTCCTCCTCTCTCTTCCTGTATCATACACACCTATTCGACAATGAAGATCCTCCACAAAGATTTCGCCCTCAACCAAGCCGGAACTGTCAAGCTCACGGCTGAAGAACCCGACGACGTCTGGGTCCTCTACAACCTCATCCTCCCCGGCGACGTCGTTTCCGCCGACACCACGCGCAAGGTCCACCTCGATTCCTCCTCCAAGAAAAACACAGCATCACGTATCAAGCTCACCCTCAACCTCAAAGTCACGTCCCGCGACTTCCACAAAGACTCCTCCACCCTCCGCCTCCACGGCCGAAACCTACACTCCAACCAACACGTCGCCGCCGGCTCCTTCCACACCCTCTCCCTCGAACCCCACAAACAATTCCTCCTCCGAAAAAATCTCTGGGAAAACGACGCCCTCCAAACCCTAAAGGACACCGCCCAAAAAGAACATTCCAAATCAAATTCCACTTCCATTCCCGACCTTGCCGTCGTTCTCTTCCACCCACACCACGCCGAGATCCACCTCATTGCAGAAGGAGCCACCGCGCACTGCACCAAGGTCGAATCCTCTCCCAACTCCAGAAAAAACGGAAAAGTTTCTTCGTCCGTGTTTTTCCGCCGAGTGTTGGCGGCGTTGGTGAGGGTCGTGGATTTCAAGGTTTTGAGGAGCGTGGTGGTAACGAGTGAGGAGTTTCGTAAGTTTGCGGTGTCGGAAGCGAGGAAGTTGAAGATACGGTGGATCGAGGATAACAAGACGCGCGTGGTGGTCGTGGAGGATGGTGATTGTTTGGAGAAAGTTTTGAGTGACCCGACGGTGACAGAGTTGGTGAAAGACAGCAGGATTGGGGCTTTTAGGGATTTGTGGGAGATGGTGTGCAACGATTCTGGCCGCGCGTGTTATGGATCCGAGGAGGTGGAGCGTGCGAAAGAAATGAGAGCGATTGAAACACTTCTGATTACCGATGATCTTTTTAGGAACGAGGAAGTTGGTACGAGGCAGAGATACGCGGGTTTGGTGAAATCGGTGAAAGACGGTGGAGGAAAGGCTTTGGTGTTTTCGCCGATGCATGTGTCGGCGCACCAACTGGCGCAGCTCACCGGCGTTGCGGCCATTCTCCGGTTTCCCTTGCCTGATCTCGAACTCCAAGATGGAAATTGTGTTAAATAA 1356 0.5133 MDCLYGERNKLMPISLLIPFHASKNKTKYTNLDITRSKTLIPLQFQPQQRRYSTGRREEKEENTTSFPPLSSCIIHTYSTMKILHKDFALNQAGTVKLTAEEPDDVWVLYNLILPGDVVSADTTRKVHLDSSSKKNTASRIKLTLNLKVTSRDFHKDSSTLRLHGRNLHSNQHVAAGSFHTLSLEPHKQFLLRKNLWENDALQTLKDTAQKEHSKSNSTSIPDLAVVLFHPHHAEIHLIAEGATAHCTKVESSPNSRKNGKVSSSVFFRRVLAALVRVVDFKVLRSVVVTSEEFRKFAVSEARKLKIRWIEDNKTRVVVVEDGDCLEKVLSDPTVTELVKDSRIGAFRDLWEMVCNDSGRACYGSEEVERAKEMRAIETLLITDDLFRNEEVGTRQRYAGLVKSVKDGGGKALVFSPMHVSAHQLAQLTGVAAILRFPLPDLELQDGNCVK* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1903 451 SUPERFAMILY Dom34/Pelota N-terminal domain-like 81 208 IPR038069 -
Pvu1g1903 451 Pfam eRF1 domain 1 81 207 IPR005140 -
Pvu1g1903 451 SMART eRF1_1_2 81 210 IPR005140 -
Pvu1g1903 451 SUPERFAMILY Translational machinery components 222 343 - -
Pvu1g1903 451 MobiDBLite consensus disorder prediction 47 67 - -
Pvu1g1903 451 Gene3D eRF1 domain 2 222 338 IPR042226 -
Pvu1g1903 451 PANTHER EUKARYOTIC RELEASE FACTOR 1 (ERF1) FAMILY PROTEIN 81 443 - -
Pvu1g1903 451 Pfam eRF1 domain 3 349 439 IPR005142 -
Pvu1g1903 451 Gene3D Pelota, domain A 81 211 IPR038069 -
Pvu1g1903 451 Gene3D - 339 449 IPR029064 -
Pvu1g1903 451 SUPERFAMILY L30e-like 347 442 IPR029064 -
Pvu1g1903 451 PANTHER PELOTA 81 443 IPR004405 GO:0070481|GO:0070966|GO:0071025
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1903 Pvu-Chr1 44849452 44851063 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1903 K06965 - gmx:100803618 517.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1903 1 44849452 44851063 Pvu1g1903 1 44849452 44851063 ECH