Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1899 ATGTCGCCTGCAATGGCACTAAATGAGCAGAGGAGCAAGGATGATACAGCAGAAGAAAAAAGTGGATATGAGAAAGGAGTGAAGCATCTGTGTGAGAAAGGTCATATTCGTTCGGTACCTAAGAAGTACATACTTCCTGTTGCTGACAGACCCACCAAGAGAGTGGAAGATTCGAATGCTTTGAACCAAAATCTTCAGCTACCCATCATTGATTTTGCCGAATTGCTTGGTCCAAACAGGCCCCAAGTCCTTCAATCCTTAGCCAATGCTTGTCAACAGTATGGATTTTTCCAGCTGGTAAATCATTGCATATCGGATGATGTTATAAGGAGCATGATAGATGTGAGTGGGAGGTTCTTTGATCTCCCTTTGGAGGAGAGAGTTAAGTACATGACAACTGATATGGGAGCACCGGTTCGATGTGGGACCAGTTTCAGTCAAACCAAAGACAAAGTGTTGTGTTGGAGGGATTTCCTGAAATTCCTGTGCCATCCCTTACCAGATTTCCTCCCCCATTGGCCTGTTTCACCAGTGGACTTTCGGAAAGTGGTTGGCACCTACGCAGAAGAAACCAGACATTTGTTTCTGGCGGTAATGGAAGCGATTCTAGAGAGCTTGGGAATAATGGAAAAGGAGGAAGAAGAGAATGTTATGAAAGAGTTTGAAAAGGGGAGCCAAATGATGGTGGCCAATTTCTACCCACCATGCCCTGAACCAGAACTTACCTTAGGTATGCCCCCTCACTCCGACTATGGCTTCCTCACACTTCTCCTGCAAGACGAGGTAGAAGGGTTGCAAGTCCAATACCAAGACAAATGGGTCACTGTTCAACCCATTCCCAATGCCTTTGTTGTCAACGTTGGTGATCACTTAGAGATATATAGCAACGGAAAATACAAGAGCGTATTACACAGAGTAATGGTGAATGAAGTTAAGAGCAGGGTGTCTGTGGCTTCGCTTCATAGCCTTCCATTTAACTGCACAGTGAAACCGTCGCCAAAACTCGTTGATGATGAAGCCAATCCCAAGCGTTACATGGACACAGATTTTGCTACCTTTCTTGCCTACGTATCCTCCCATGAGCCAAATAAAAAGGATTTTCTGGAGTCAAGAAAATTGCACTGA 1125 0.448 MSPAMALNEQRSKDDTAEEKSGYEKGVKHLCEKGHIRSVPKKYILPVADRPTKRVEDSNALNQNLQLPIIDFAELLGPNRPQVLQSLANACQQYGFFQLVNHCISDDVIRSMIDVSGRFFDLPLEERVKYMTTDMGAPVRCGTSFSQTKDKVLCWRDFLKFLCHPLPDFLPHWPVSPVDFRKVVGTYAEETRHLFLAVMEAILESLGIMEKEEEENVMKEFEKGSQMMVANFYPPCPEPELTLGMPPHSDYGFLTLLLQDEVEGLQVQYQDKWVTVQPIPNAFVVNVGDHLEIYSNGKYKSVLHRVMVNEVKSRVSVASLHSLPFNCTVKPSPKLVDDEANPKRYMDTDFATFLAYVSSHEPNKKDFLESRKLH* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1899 374 Gene3D - 18 356 IPR027443 -
Pvu1g1899 374 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 223 323 IPR005123 -
Pvu1g1899 374 Pfam 2OG-Fe(II) oxygenase superfamily 226 321 IPR044861 -
Pvu1g1899 374 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 17 372 - -
Pvu1g1899 374 SUPERFAMILY Clavaminate synthase-like 27 360 - -
Pvu1g1899 374 PANTHER LEUCOANTHOCYANIDIN DIOXYGENASE-LIKE PROTEIN 17 372 - -
Pvu1g1899 374 Pfam non-haem dioxygenase in morphine synthesis N-terminal 67 165 IPR026992 -
Pvu1g1899 374 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1899 Pvu-Chr1 44805590 44807548 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1899 9 348 Glycosyltransferase AT5G59530 34.375 1.71e-49 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1899 - - vun:114179327 691.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1899 1 44805590 44807548 Pvu7g2326 7 46599354 46601900 PCT