Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1896 ATGGCTTTGCCAGTGCAGCAGCCTCATTTTGTATTGGTTCCACTTCTGGCTCAAGGGCACATGATCCCCATGGTTGACATAGCAAGGATTCTGGCAGAGAGAGGGGTTATTATCACATTGATAAGTACCCCTCACAATGCCTCAAGACTGGGGCAAACAATCATTAGAGCAGCAAAATCTGGCCTTCAAATTCAGCTTCTAGAAATTCCATTTCCATGCCAGAAAGTTGGACTTCCATTAGGCTGTGAAAACCTTGATACTTTACCATCAAAAAACCTACTCAGAAACTTTTATATTGGCCTTGACATGATGCAAGAACCTGTGGAGAAGTACCTCCAAAACCACCCTTCTCCTCCAAGTTGCATTATATCAGATAAATGCCTCTCTTGGACTTCTACAACAGCCAAGAAGTTCAATATTCCAAGGCTTGTCTTTCACGGGATGTCTTGTTTTTCATTACTTAGCTCCTATAATATCAAGCTCTACAATTCTCATCTATCATGCTCTTCTGATTCAGAATCTTTTCTCATACCAGGACTGCCTCAGAGGGTTGAGATAACCAAAGCACAACTCCCTGGAGCCTTTTCTTCTCTGCCTGATCTGGATGATTTTAGACACAAAATGTTGGAGGCTGAAATGTCTTCTTTTGGGGTTGTGGTAAATAGCTTTGAACAACTGGAACATGGTTGTGTAAAGGAGTATGAGAAGGCCTTGAACAAGAGAGTTTGGTGCATTGGTCCTGTGTCTTTATCCAACAAGGATAGTTTGGACAAGTTTGAGAGAGGAAACAAGTCTTCAATTGAAGAGAAGCAATGCTTGGAATGGCTAAACTCAAAAGAACCAAGATCAGTTATTTATGTATGCCTTGGAAGCTTGTGTAGGCTTGTTACATCTCAATTGATAGAACTTGCTTTGGGTTTAGAAGCATCAAGTAAACCATTTATATGGGTAGTCAAAACTGCAGGAGAAAACATTTCAGAGCTCAATAACTGGTTAGTGAATGAAAATTTTGATGAAAGGGTAAGAGGTAGAGGACTTCTCATAAAGGGATGGGCTCCACAAACATTGATATTGTCTCACGCTTCTGTTGGTGCATTCTTGACCCACTGTGGCTGGAATTCAACGATAGAAGGCGTGTGCTCTGGGTTGCCAATGATAACATGGCCTTTGTTTGCTGAGCAATTCTTGAATGAAAAATTTATTGTGCAAGTTTTGAAAATTGGAGTTAGAATAGGCGTGGAGGTTCCGGTAAGGTGGGGTGATGAAGAGAAAGTTGGTGCAATGGTGAAGAAAAGTAGAATCAGTGAGGCTATAGAGATGTGCATGGTGGGTGGTGAAGAGGGGGAAAAGAGGAGGAATAGAGCAACAGAGCTTGGAAAGATGGCACGAAATGCCACGGTGGAGGAAGGTTCATCTCACTCCAACGTTTCATGCTTAATTGAAGACATTCTGAGACATTAA 1461 0.4175 MALPVQQPHFVLVPLLAQGHMIPMVDIARILAERGVIITLISTPHNASRLGQTIIRAAKSGLQIQLLEIPFPCQKVGLPLGCENLDTLPSKNLLRNFYIGLDMMQEPVEKYLQNHPSPPSCIISDKCLSWTSTTAKKFNIPRLVFHGMSCFSLLSSYNIKLYNSHLSCSSDSESFLIPGLPQRVEITKAQLPGAFSSLPDLDDFRHKMLEAEMSSFGVVVNSFEQLEHGCVKEYEKALNKRVWCIGPVSLSNKDSLDKFERGNKSSIEEKQCLEWLNSKEPRSVIYVCLGSLCRLVTSQLIELALGLEASSKPFIWVVKTAGENISELNNWLVNENFDERVRGRGLLIKGWAPQTLILSHASVGAFLTHCGWNSTIEGVCSGLPMITWPLFAEQFLNEKFIVQVLKIGVRIGVEVPVRWGDEEKVGAMVKKSRISEAIEMCMVGGEEGEKRRNRATELGKMARNATVEEGSSHSNVSCLIEDILRH* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1896 486 PANTHER GLYCOSYLTRANSFERASE 1 485 - -
Pvu1g1896 486 ProSitePatterns UDP-glycosyltransferases signature. 351 394 IPR035595 -
Pvu1g1896 486 CDD GT1_Gtf-like 8 463 IPR002213 GO:0008194
Pvu1g1896 486 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 268 402 IPR002213 GO:0008194
Pvu1g1896 486 Gene3D Glycogen Phosphorylase B; 5 273 - -
Pvu1g1896 486 Gene3D Glycogen Phosphorylase B; 274 467 - -
Pvu1g1896 486 PANTHER PHOSPHATIDYLCHOLINE:DIACYLGLYCEROL CHOLINEPHOSPHOTRANSFERASE 1-RELATED 1 485 - -
Pvu1g1896 486 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 8 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1896 Pvu-Chr1 44775924 44777384 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1896 9 485 Glycosyltransferase AT2G36780 51.674 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1896 - - ccaj:109818058 778.859