Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1894 ATGGATTCAACACCCCTTTCTAATCTCCACTTTGTGTTCATCCCGTTAATGGCCCCGGGTCATCTTCTTCCCATGGTGGACATGGCCAAAATGTTGGCTCGACGCAAAGTGAAAGTCAGCATAGTCACCACACCCCTCAATTCCATCCACTTCCAAGCTAGCATAGACAGAGAGATTCAATCTGGCTCACCCATCCAGATTCTGCATGTTCAGTTTCCATGGGCTGAGGCTGGAATACCAAAGGGGTGTGAGAGCCAAGACACTCTTCCTTCAATGAATCTCCTATACAACTTCAATGTCGCTTTGAACTTGTTGCAGCACCCGATAGAAGAGCTTCTGCAAAACCAAAGCCCCTTTCCAAGCTGCATAGTTTCCGACAAAAATTTCCTGTGCGTGGCTGATGTTGCCGACAAGTTGAATGTCCCTAGAATAATATTCGACGGGACTAGTTGTTTTTCTCTGCTGTGCTGCCACAGTTTAAACAAGAACAAGGTCCATCAAGCTGTGTCTTATGATGAGAAATTTGTTGTGCCCGGATTGCCCCACAAGATCGAATTGCGAAGGTCTCAACTCCCGGGGATATTCTATCCTGGCACGGACTTAAAGTTGCAAGCTTTTCGTGAGGCAATAGGGGAAGCTGCGAAAAAAGCATATGGGATCATGGCTAATAGTTTTGAAGAGTTGGAAGCGGAGTATGTTGAAGAGTATGAAAGGGTTACGGGGCAGAAGGTATGGTGTGTAGGACCTGTTTCGCTGTGCAATAAGGATGACACGGAGAAGGCTCTGAGAAGTAAGAGAAACTCGAATGATGAGAGTAAGTATGTGAAGTGGCTTGATTCATGGCCTGAAAGGTCTGTGATTTACGTGTGCCTTGGTAGCCAAAACCGTGCAACGCCTGAGCAGTTGATAGAAGTGGGGTTAGGATTGGAAGCGACAAAAAGACCATTCATTTGGGTTCTTAGAGGTGCATATAGAAGAGAGGAAATGGAGAAGTGGCTGTTGGAAGAAGGGTTTGAAGAGAGGGTGAAAGGGAGAGGGATTTTGATAAAGGGTTGGGTGGCACAAGTGTTGATATTGTCACATAGAGCAATAGGAGCGTTCTTGACACATTGTGGATGGAATTCGACTCTTGAAGGGATCTGTGGTGGGGTTCCGTTGGTGAGTTATCCTCTTTATGCTGAGCAGTTTCTTAATGAGAAGTTTGTTGTGCAGGTAGTGGAGAGTGGGGTGAGTGCAGGGGCTGAAACTGTTGTGCGCTTGGGAGATGAATTTAAGTCTCGAGTAGAGGTGACGAGGGACAATGTTAGGGATTCAATTGAGAAAGTAATGGGTGAAGGCAAAGAAAAGGATGTGATAAGGGAAAGAGCTAGAAACTATGCAGACATGGCAAGCAAAACAATACAAGAAGGTGGCTCATCTTACAATAACATGTCTCTGCTAATTGAAGACATTGTCCGTTTGAAAATGTCACAACAAAAGGCCACACCAAATGCTTTTTTAGACTAG 1506 0.4535 MDSTPLSNLHFVFIPLMAPGHLLPMVDMAKMLARRKVKVSIVTTPLNSIHFQASIDREIQSGSPIQILHVQFPWAEAGIPKGCESQDTLPSMNLLYNFNVALNLLQHPIEELLQNQSPFPSCIVSDKNFLCVADVADKLNVPRIIFDGTSCFSLLCCHSLNKNKVHQAVSYDEKFVVPGLPHKIELRRSQLPGIFYPGTDLKLQAFREAIGEAAKKAYGIMANSFEELEAEYVEEYERVTGQKVWCVGPVSLCNKDDTEKALRSKRNSNDESKYVKWLDSWPERSVIYVCLGSQNRATPEQLIEVGLGLEATKRPFIWVLRGAYRREEMEKWLLEEGFEERVKGRGILIKGWVAQVLILSHRAIGAFLTHCGWNSTLEGICGGVPLVSYPLYAEQFLNEKFVVQVVESGVSAGAETVVRLGDEFKSRVEVTRDNVRDSIEKVMGEGKEKDVIRERARNYADMASKTIQEGGSSYNNMSLLIEDIVRLKMSQQKATPNAFLD* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1894 501 CDD GT1_Gtf-like 9 464 IPR002213 GO:0008194
Pvu1g1894 501 PANTHER GLYCOSYLTRANSFERASE 7 493 - -
Pvu1g1894 501 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 269 405 IPR002213 GO:0008194
Pvu1g1894 501 Gene3D Glycogen Phosphorylase B; 276 468 - -
Pvu1g1894 501 ProSitePatterns UDP-glycosyltransferases signature. 352 395 IPR035595 -
Pvu1g1894 501 PANTHER GLYCOSYLTRANSFERASE 7 493 - -
Pvu1g1894 501 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 9 487 - -
Pvu1g1894 501 Gene3D Glycogen Phosphorylase B; 7 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1894 Pvu-Chr1 44763581 44765452 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1894 8 487 Glycosyltransferase AT2G36780 45.643 4.93e-161 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1894 - K13496 gmx:100820150 770.385