Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1893 ATGGCTTCCCAAGAACAGCAGCTTCACTTCGTATTGTTCCCATTCATGGCACAAGGCCACCTGATCCCTATGATGGACTTTGCAAAAGTGTTGGTGCAACACAACGTTATTGTGACAGTAGTCACAACACCACATAACGCAGCTCGTTTTGCATCAATCGTTGATCGCTATATTGAAGCGGGGTTTCAGATTAGAGTCGCTCAACTTCAATTTCCAACTAAAGAGTTTGGATTACCACATGAGTGTGAGAATCTCGATATGCTGCCTACACTCGGCATGGGGTTTCAATTTTTCGGTGCAGCAAACATCTCACGGGAACCAGTAGAAAAATTATTTGAAGAGTTAACGCCAGCACCAAGTTGCATAATTTCTGATATGGGTTTGCCATATACAACCCACATAGCCAAAAAATTCAACATTCCGAGGATTTCTTTTGCTGCTGTAAGTTGCTTCTTTCTACTATGTTTGCGTACTTTACAAACTTATAATATGATGGAGAATAAAGCTACTGAATCGGAGTATTTTGTTTTGCCTGGTTTACCTGACAAAATTGAAATAACCAAAGCCCAAACAGAACACTTAATGGATAAAAGATGGAAAGAGATTATGGATGAATATGGTGCACCTGGTGTTGCTACTTATGGGATAATCGTGAATTCTTTTGAAGAGTTGGAGCCAGCATATGCAAGGGAATACAAGAAGATCAATAATGATAAAGTATGGTGTATTGGACCACTATCACTTAGTAACAAGGATCGCATGGACAAGGCTGAAAGAGGTAACAAGGCTTCAATTGACGAGTGCCACCTGAAGTCCTGGCTTGATCGTCAGCAACCAGGGACTGTGATCTATGCATGCCTTGGAAGCCTATGCAATTTAACACCGCCACAGTTGATAGAGCTTGGCTTAGCCTTGGAAGCATCAAAAAGACCCTTCATTTGGGTTATCAGGGGAGGAAGTTTGTCAGAAGCAATGGAAAAGTGGATAAAGGAAGACGGGTTTGAGGAAAGGACCAATGCTAGAAGCCTTCTAATTCGGGGTTGGGCTCCTCAATTGCTAATACTATCACACCCTGCAATTGGAGGGTTCATAACACACTGTGGTTGGAACTCTACCTCAGAAGCAATATGTTCCGGGGTACCAATGGTTTCATGGCCACTATTTGGGGATCAATTTTTTAATGAAAATTTGATTGTGCAGATACTGAAAGTTGGAGTGAAGGTTGGTGTGAAGAGTACTACTAAATGGGGAAAGGAAGAGGAAATTGGTGTGGAAGTGAAGAAGAAAGATATTGAAAGGGCAATAGAAAGTGTAATGGATGAGAGTAGCGAAAGTGAAGAAAGAAGAAAAAGGGTAAGAGAACTTGCAGAGGTGGCTAAGAGAGCTGTAGAGAAAGGGGGATCCTCTCATTCTGATGTGACCTTGCTCATCCAAGATATCATGCAAAAGATCAAGAGAGATATGTGA 1467 0.4172 MASQEQQLHFVLFPFMAQGHLIPMMDFAKVLVQHNVIVTVVTTPHNAARFASIVDRYIEAGFQIRVAQLQFPTKEFGLPHECENLDMLPTLGMGFQFFGAANISREPVEKLFEELTPAPSCIISDMGLPYTTHIAKKFNIPRISFAAVSCFFLLCLRTLQTYNMMENKATESEYFVLPGLPDKIEITKAQTEHLMDKRWKEIMDEYGAPGVATYGIIVNSFEELEPAYAREYKKINNDKVWCIGPLSLSNKDRMDKAERGNKASIDECHLKSWLDRQQPGTVIYACLGSLCNLTPPQLIELGLALEASKRPFIWVIRGGSLSEAMEKWIKEDGFEERTNARSLLIRGWAPQLLILSHPAIGGFITHCGWNSTSEAICSGVPMVSWPLFGDQFFNENLIVQILKVGVKVGVKSTTKWGKEEEIGVEVKKKDIERAIESVMDESSESEERRKRVRELAEVAKRAVEKGGSSHSDVTLLIQDIMQKIKRDM* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1893 488 Gene3D Glycogen Phosphorylase B; 1 272 - -
Pvu1g1893 488 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 8 482 - -
Pvu1g1893 488 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 281 412 IPR002213 GO:0008194
Pvu1g1893 488 Coils Coil 428 448 - -
Pvu1g1893 488 PANTHER GLYCOSYLTRANSFERASE 7 483 - -
Pvu1g1893 488 PANTHER UDP-GLYCOSYLTRANSFERASE 73C5-RELATED 7 483 - -
Pvu1g1893 488 CDD GT1_Gtf-like 8 462 IPR002213 GO:0008194
Pvu1g1893 488 ProSitePatterns UDP-glycosyltransferases signature. 348 391 IPR035595 -
Pvu1g1893 488 Gene3D Glycogen Phosphorylase B; 273 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1893 Pvu-Chr1 44758264 44759730 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1893 8 485 Glycosyltransferase AT2G36760 55.925 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1893 K13496 K22771 gmx:100782035 827.394