Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1891 ATGTCTTCCCAAGAACAAAGGCCACACTTTGTCCTGATTCCATTGATGGCCCAAGGCCACTTGATCCCCATGATGGACTGGGCGAAATTATTGGTGCACCACGGTGTTACTGTGACTGTAGTCACCACGCCGCATAACGCAGCTCGTTTCAGACCTATCTTCGATCGTTATGTTGAGAATGAGAATGGACTTGCTATTAAATTAGTTCAAGTTCGATTCCCATGTGAAGAAGCAGGACTGCCCGAAGGATGCGAGAATATCGATATGATACCTTCACTTGGCACGGCCAGGACTTTCTTCGAAGCAACAAACCTTCTACAGCAACCCGTGGAAAAACTCTTTGGAGAGTTATCACCATCACCAAGCTGCATAATCTCCGATATGTGTTTGCCATTTACATACCATATCGCCAAAAAATTCAATATCCCAAGGATTTCTTTTCTTGGTGTAAGTTGCTTTTGTCTTCTGTGTCATCATAATATTCTCATCCATAATGTCAGGGACAACGTAGCATCGGACTCAGAGTACTTTGTTGTGCCTGATTTCCCTGACAAGATTGAGATTACCATAGCACAGAGTGGTGTGTCGATGAATGAAAAGTGGGAACAGTTTCGTGAAGAAATTGCGGTTGCTGAAAAGAGTGCTTATGGTATAATCATGAATTCTTTTGAAGAGTTGGAGCCAGCATATGCAAGGGATTACAAGAAGGTAAAAAATGATAAAATGTGGTGTATAGGACCTGTATCACTTATTAACAAGGATGACTTGGATAAGGCTGAAAGAGGTAGGGGCTCAATCGATGTGTCCCAATATCTAAAATGGCTTGATTGTGAGAAGGCAGGGAGTGTAATCTATGCATGCCTTGGAAGCCTATGCAATTTAACAGCACCCCAGTTGATAGAGCTTGGTTTGGCCTTGGAAGCATCACAAAGACCCTTCATTTGGGTTATCAGGGAAGGACGTTATTCAGAAGCATTGGAAAAGTGGATCGAGGAAAATGGATTTGAGGAAAGGACAAGTTCTAGAAGCCTTCTCATTCGGGGGTGGGCTCCTCAATTGTTGATATTATCACACCCTGCAATTGGAGGCTTCATAACACACTGTGGTTGGAACTCTACCTTAGAAGCAATATGTGCTGGTGTTCCAATGATTACATGGCCAATGTTTGGTGATCAGTTCTTGAATGAAAGTTTAGTGGTTCAAGTTCTAAACGTTGGAGTAAAGGTTGGGGTGGAAACTCCAATGACATGGGGCCAGGAAGAGGAAATGGGTTTGGAAGTGAAAAAGGAAGACGTTGAAAGGGCAATAATAGAGATAATGGATGTGACAAGTGAAGGTGAAGAAAGAAGAAAAAGGATAAGAGAATTGAGCGAGATGGCTAAAAGAGCCGTGGAGAAAGGGGGATCCTCTCACTCTAATGTCAACTTGCTTATCCAGGATATTATGCAAAAAAACAAGGGAGATGTGCTATAG 1473 0.427 MSSQEQRPHFVLIPLMAQGHLIPMMDWAKLLVHHGVTVTVVTTPHNAARFRPIFDRYVENENGLAIKLVQVRFPCEEAGLPEGCENIDMIPSLGTARTFFEATNLLQQPVEKLFGELSPSPSCIISDMCLPFTYHIAKKFNIPRISFLGVSCFCLLCHHNILIHNVRDNVASDSEYFVVPDFPDKIEITIAQSGVSMNEKWEQFREEIAVAEKSAYGIIMNSFEELEPAYARDYKKVKNDKMWCIGPVSLINKDDLDKAERGRGSIDVSQYLKWLDCEKAGSVIYACLGSLCNLTAPQLIELGLALEASQRPFIWVIREGRYSEALEKWIEENGFEERTSSRSLLIRGWAPQLLILSHPAIGGFITHCGWNSTLEAICAGVPMITWPMFGDQFLNESLVVQVLNVGVKVGVETPMTWGQEEEMGLEVKKEDVERAIIEIMDVTSEGEERRKRIRELSEMAKRAVEKGGSSHSNVNLLIQDIMQKNKGDVL* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1891 490 PANTHER UDP-GLYCOSYLTRANSFERASE 73C5-RELATED 7 485 - -
Pvu1g1891 490 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 7 485 - -
Pvu1g1891 490 Gene3D Glycogen Phosphorylase B; 4 270 - -
Pvu1g1891 490 CDD GT1_Gtf-like 8 463 IPR002213 GO:0008194
Pvu1g1891 490 Gene3D Glycogen Phosphorylase B; 271 465 - -
Pvu1g1891 490 ProSitePatterns UDP-glycosyltransferases signature. 349 392 IPR035595 -
Pvu1g1891 490 PANTHER GLYCOSYLTRANSFERASE 7 485 - -
Pvu1g1891 490 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 282 402 IPR002213 GO:0008194
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1891 Pvu-Chr1 44748834 44750530 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1891 9 484 Glycosyltransferase AT2G36760 56.458 0.0 572
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1891 K13496 - gmx:100527132 755.747