Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1890 ATGGTTCTCCTAACAAACAGCCCTCACTTTGTATTATTCCCCATGATGGCTCAAGGTCACATCATCCCCATGATGGACATTGCAAGAATATTGGCACAGCGTGGTGTGATTATCACCTTATTCACAACCCCAAAAAATGCATCACGTTTCAGTTCTGTTATATCTCGAGCTGTTTCAACAGGCCTCAAAATCCGTGTCCTACAACTTCCTTTTCCATCAAAAGAAGCAGGGCTACCTGAAGGGTGTGAGAATTTGGACATGGTAACTTCAAATGATATTTCCAAAATTTTCCATGTCATCCACATGCTCCAAAAGCCAGCAGAGGAGTTCTTTGAGACACTTACGCCCAAACCAAGTTGCATAATCTCTGACTTCTGCATTCCTTGGACCGCTGAATTAGCCGAAAACTATCACATTCCAAGGATTTCTTTCCACGGATTTTCATGTTTTTGCCTCCAGTGCCGGTACGTGATACATACTTCAAAGTTTTGTAAAAGCATCACTTCAGAATCCAAATACTTCACTATTCCCGGCATACCCGACCAAATTCAAGTTACCAGAGAGCAGTTACCAGGATCACTTGGCAAGGATTTGGATGACTTTAAAGATCAGGTGCGTCATGCTGAAATGAAGTCTTATGGGGTTATCATAAATAGTTTTGAAGAGTTAGAGAAGGCATATGTGAGGGATTACAAGAAGGTAAGAAATAATAAGGCGTGGTGCATTGGTCCTGTTTCATTGTGCAACAAAGATGGTTTGGATAAGTCTCAAAGAGGCAACCAGGCCTCAATTAACGAGCACCATTGCTTGACGTGGCTAAATTTGCAGCAACCCAAGTCAGTGGTCTATGTTTGTTTTGGAAGCATATGCAACTTGATTACTTCAGAACTTGTGGAGTTGGCCTTGGCCTTGGAAGATACAAAAAGGCCATTTGTATGGGTCATTAGGGAGGGAAGTCAGTTCCAAGGACTAGAAAAGTGGATCTCTGAAGAAGGGTTCGAGGAAAGGACCAAAGGGAGAGGCCTTATAATTCGAGGTTGGGCACCACAAGTGATAATATTATCACACCCTTCCATTGGAGGATTCTTAACACACTGCGGTTGGAATTCAACACTTGAAGGGATAAATGGTGGAGTGCCACTGGTTACCTGGCCTCTATTTGGTGATCAGTTTTTGAATGAGAAGCTTGTTACTGATGTGTTGAAGATTGGAGTGAGCGTTGGGGTAGAGGTTCCAGTGAAATGGGGAGAGGAAGAGAAGAGGGGTGTGTTGGTGAAGAAGGATGATATTAAGAGGGCAATATGCATGGTGATGGATGAAGATGGAGAAGAAGGCAAAGAGAGAAGAGAAAGGGTAAGGAAACTGAGTGAGATGGGAAAGAGAGCCGTTGAAGAAGGAGGCTCTTCTCATCTTGATATCACTTTGCTAATCCAAGACATTATGCAACAATCAACTACCCAAGAGGCTTAA 1470 0.4299 MVLLTNSPHFVLFPMMAQGHIIPMMDIARILAQRGVIITLFTTPKNASRFSSVISRAVSTGLKIRVLQLPFPSKEAGLPEGCENLDMVTSNDISKIFHVIHMLQKPAEEFFETLTPKPSCIISDFCIPWTAELAENYHIPRISFHGFSCFCLQCRYVIHTSKFCKSITSESKYFTIPGIPDQIQVTREQLPGSLGKDLDDFKDQVRHAEMKSYGVIINSFEELEKAYVRDYKKVRNNKAWCIGPVSLCNKDGLDKSQRGNQASINEHHCLTWLNLQQPKSVVYVCFGSICNLITSELVELALALEDTKRPFVWVIREGSQFQGLEKWISEEGFEERTKGRGLIIRGWAPQVIILSHPSIGGFLTHCGWNSTLEGINGGVPLVTWPLFGDQFLNEKLVTDVLKIGVSVGVEVPVKWGEEEKRGVLVKKDDIKRAICMVMDEDGEEGKERRERVRKLSEMGKRAVEEGGSSHLDITLLIQDIMQQSTTQEA* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1890 489 PANTHER GLYCOSYLTRANSFERASE 5 488 - -
Pvu1g1890 489 ProSitePatterns UDP-glycosyltransferases signature. 347 390 IPR035595 -
Pvu1g1890 489 Gene3D Glycogen Phosphorylase B; 269 464 - -
Pvu1g1890 489 Gene3D Glycogen Phosphorylase B; 4 268 - -
Pvu1g1890 489 CDD GT1_Gtf-like 8 459 IPR002213 GO:0008194
Pvu1g1890 489 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 266 398 IPR002213 GO:0008194
Pvu1g1890 489 PANTHER GLYCOSYLTRANSFERASE 5 488 - -
Pvu1g1890 489 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 8 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1890 Pvu-Chr1 44744475 44746373 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1890 9 487 Glycosyltransferase AT2G36760 54.865 0.0 570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1890 K13496 K22771 gmx:100802029 815.068