Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1889 ATGCCTTCCCAAGAACAAAAGCCACATTTTGTCCTGTTTCCATTGATGGCCCAAGGCCACATGATCCCTATGATGGACATCGCAAAAATATTGGTGCATCGCAATGTTATTGTGACAGTAGTCACAACGCCAAATAATGCTACTCGTTTCACCTCAATCTTTGATCGCTATATTCACTCTGAGGTTCCTATTAGATTAGTTCAAGTTCAATTCCCATGTGAAGAGGCAGGAGTACCAGACGGGTGTGAGAATCTCGATATGATGCCTTCACTAGGCACAGGCACCACTTTCTTCAAAGCAGCAAACCTTCTACAAGAACCGGTGGAAAAACTATTTGAGGAGTTAACACCAGCACCAAGCTGCATCATTTCTGATATGTGTTTACCATACACATCCCATATCGCCAAAAAATTCAATATTCCAAGGATTTCTTTTGTCGGAGTAAGTTGCTTTTGTCTTCTGTGTAACCATAATATAAGAATCTATAATGCTGTGGAGAGTGTATCGTCTGAGTCCGATTACTTTGTTGTGCCTGGTATCGCTGACAAAATTGAAATTACCAAAGCACAGGCACAACCCATGAATGAAAGCTGGAAACAGTTTGGTAGCGAAATCATGGTTGCTGAAATGAGTACTTATGGGATAATCATGAATTCTTTTGAAGAGTTGGAGCCAGCATATGCAAGGGATTACAAGAAGGTGAGAAATGATAAAGTGTGGTGTATAGGACCTGTATCACTTATTAACAAGGATGACTTGGATAAAGCTGAAAGAGGTAGGGGCTCAATGGATGTGTCCCAATATCTAAAATGGCTTGATTGTGAGAAGGCAGGGAGTGTAATCTATGCATGCCTTGGAAGCCTATGCAATTTGACAGCACCCCAGTTGATAGAGCTTGGTTTGGCCTTGGAAGCATCACAAAGACCCTTCATTTGGGTTATCAGGGAAGGACGTTATTCAGAAGCATTGGAAAAGTGGATCGAGGAAAATGGATTTGAGGAAAGGACAAGTTCTAGAAGCCTTCTCATTCGGGGCTGGGCTCCTCAATTGTTAATATTATCACACCCTGCAATTGGAGGGTTCATAACACACTGTGGTTGGAACTCTACCTTAGAGGCAATATGTGCTGGTGTTCCAATGATTACATGGCCAATGTTTGGTGATCAGTTCTTGAATGAAAGTGTAGTGGTGCACGTTTTGAAAGTTGGAGTAAAGGTTGGGGTGCAAACTCCGATGAGATGGGGCAAGGAAGAGGAAATTGGTGTGGAAGTGAAAAAGGTAGACGTTGAAAGGGCAATAATAGAGATAATGGATGTGACAAGTGAAGGTGAAGAAAGAAGAAAAAGAATAAGAGAATTGAGCGAGATGGCTGAAAGAGCCGTGGAGAAAGGGGGATCCTCTCACTCTAACGTGAACTTGCTTATCCAGGATATCACGCAAAAAATCCAGAGAGACGTGTGA 1461 0.423 MPSQEQKPHFVLFPLMAQGHMIPMMDIAKILVHRNVIVTVVTTPNNATRFTSIFDRYIHSEVPIRLVQVQFPCEEAGVPDGCENLDMMPSLGTGTTFFKAANLLQEPVEKLFEELTPAPSCIISDMCLPYTSHIAKKFNIPRISFVGVSCFCLLCNHNIRIYNAVESVSSESDYFVVPGIADKIEITKAQAQPMNESWKQFGSEIMVAEMSTYGIIMNSFEELEPAYARDYKKVRNDKVWCIGPVSLINKDDLDKAERGRGSMDVSQYLKWLDCEKAGSVIYACLGSLCNLTAPQLIELGLALEASQRPFIWVIREGRYSEALEKWIEENGFEERTSSRSLLIRGWAPQLLILSHPAIGGFITHCGWNSTLEAICAGVPMITWPMFGDQFLNESVVVHVLKVGVKVGVQTPMRWGKEEEIGVEVKKVDVERAIIEIMDVTSEGEERRKRIRELSEMAERAVEKGGSSHSNVNLLIQDITQKIQRDV* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1889 486 Gene3D Glycogen Phosphorylase B; 268 462 - -
Pvu1g1889 486 CDD GT1_Gtf-like 8 460 IPR002213 GO:0008194
Pvu1g1889 486 Gene3D Glycogen Phosphorylase B; 4 267 - -
Pvu1g1889 486 ProSitePatterns UDP-glycosyltransferases signature. 346 389 IPR035595 -
Pvu1g1889 486 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 277 399 IPR002213 GO:0008194
Pvu1g1889 486 PANTHER GLYCOSYLTRANSFERASE 7 481 - -
Pvu1g1889 486 PANTHER UDP-GLYCOSYLTRANSFERASE 73C5-RELATED 7 481 - -
Pvu1g1889 486 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 7 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1889 Pvu-Chr1 44740078 44741673 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1889 1 480 Glycosyltransferase AT2G36750 56.263 0.0 574
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1889 K13496 - gmx:100777426 791.956