Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1888 ATGGTGTTCCTAACAGAAAATCTTCACTTCGTCTTGTTTCCCCTCATGGCTCAAGGCCACATGATCCCCATGATAGATATTGCAAGACTATTGGCACAACGTGGTGTGGTTGTTACCATATTCACCACCCCAAAAAATGCATCACGTTTCAATTCAGTTCTTTCTCGTGCTGTTTCATCTGGTCTGCAAATCCGACTTGCACAATTCCATTTTCCAGCAAAAGAGGCAGGGCTACCTGAAGGGTGTGAGAATTTCGACATGATAATAAGACCAGAAGATATGATGAACAAAATGTTCCATGCCATCAGCATGCTTCATAAGTCAGCAGAGGAATTGTTTGAAGCACTAACACCAAAACCAAGTTGCATAATCTCTGACTTCACCCTTCCTTGGACCGCTCAAGTAGCCGAAAAGTATCATATTCCAAGGATTTCGTTCCACGGATTTTCTTGCTTCTGCCTCCATTGTCTGCACCAGGTACACATTTCAGAGGTTTGTGAAAGCATCACTTCAGAATCCGAGTATTTCAAGATTCCTGGCATACCTGACCAAATTCAAGTTACCAAAGAGCAGATACCTCTGATGGTCCCGACATTAAACGAACATAAAATATTTATGGAGCAGATACGCGATGCTGAAATGAAGTCATATGGGGTAATCATAAATACTTTTGAAGAGTTGGAGAAAGCATATGTGAGGGATTACAAGAAGGTGAGAAACGATAAACTTTGGTGCGTTGGTCCAGTTTCATTATGTAACAAAGATAGTTTGGATAAGATTCAAAGAGGCAACCAGGCCTCAATTAACGAGCACCATTGCTTGAAGTGGCTAGATTTGCAGCAACCTAAGTCAGTGGTCTATGTTTGTTTTGGAAGCTTATGCAACTTGATTTCTTCACAACTTGTGGAGTTGGCCTTGGCCTTGGAAGATACAAAAAGGCCATTTGTATGGGTTATTAGGGAGGGAAGTCAGTTCCAAGAACTAGAAAAGTGGATCTCTGAAGAAGGGTTCGAGGAAAGAACCAAAGGGAGAGGCCTTATAATTCGAGGTTGGGCACCACAAGTGATAATATTATCACACCCTTCCATTGGAGGATTCTTAACACACTGTGGTTGGAATTCAACACTTGAAGGGATAAGTGTTGGAGTGCCACTGGTTACCTGGCCTCTATTTGCAGATCAATTTTTAAATGAGAAGCTTGTTACTGATGTGTTGAAGATTGGAGTGAGCGTTGGGGTAGAGGTTCTACTGAAGTGGGGAGAGGAAGAGAAGATAGGTGTGTATGTGAAGAAGGATGATATTAAGAGGGCAATATGCATGGTGATGGATGAAGATGGAGAAGAAGGCAAAGAGAGAAGAGAAAGGGTAAGGAAACTGAGTGAGATGGGAAAGAGAGCCGTTGAAGAAGGAGGCTCTTCTCATCTTGATATCACATTGCTTATCCAGGACATCATGCAACAATCAACAACCAAAGATGATACATATTTGACGCACGCTTGA 1500 0.4213 MVFLTENLHFVLFPLMAQGHMIPMIDIARLLAQRGVVVTIFTTPKNASRFNSVLSRAVSSGLQIRLAQFHFPAKEAGLPEGCENFDMIIRPEDMMNKMFHAISMLHKSAEELFEALTPKPSCIISDFTLPWTAQVAEKYHIPRISFHGFSCFCLHCLHQVHISEVCESITSESEYFKIPGIPDQIQVTKEQIPLMVPTLNEHKIFMEQIRDAEMKSYGVIINTFEELEKAYVRDYKKVRNDKLWCVGPVSLCNKDSLDKIQRGNQASINEHHCLKWLDLQQPKSVVYVCFGSLCNLISSQLVELALALEDTKRPFVWVIREGSQFQELEKWISEEGFEERTKGRGLIIRGWAPQVIILSHPSIGGFLTHCGWNSTLEGISVGVPLVTWPLFADQFLNEKLVTDVLKIGVSVGVEVLLKWGEEEKIGVYVKKDDIKRAICMVMDEDGEEGKERRERVRKLSEMGKRAVEEGGSSHLDITLLIQDIMQQSTTKDDTYLTHA* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1888 499 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 267 403 IPR002213 GO:0008194
Pvu1g1888 499 PANTHER GLYCOSYLTRANSFERASE 5 495 - -
Pvu1g1888 499 Gene3D Glycogen Phosphorylase B; 275 468 - -
Pvu1g1888 499 ProSitePatterns UDP-glycosyltransferases signature. 351 394 IPR035595 -
Pvu1g1888 499 CDD GT1_Gtf-like 8 463 IPR002213 GO:0008194
Pvu1g1888 499 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 5 485 - -
Pvu1g1888 499 Gene3D Glycogen Phosphorylase B; 4 274 - -
Pvu1g1888 499 PANTHER GLYCOSYLTRANSFERASE 5 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1888 Pvu-Chr1 44735155 44736955 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1888 8 491 Glycosyltransferase AT2G36760 56.701 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1888 K13496 K22771 gmx:100802029 818.535