Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1887 ATGCTTTCCCAAACAACCAATCTTCACTTCGTCTTGTTTCCCCTCATGTCTCAAGGCCACATGATCCCCATGATGGATATTGCAAGACTACTGGCGCACCGTGGTGTGGTTGTTACCATATTCACCACCCCAAAAAATGCATCACGTTTCAATTCAGTTCTTTCTCGTGCTCTATCATCTGGTCTCCAAATCCGGTTTCTACAACTTCATTTTCCAGCAAAAGAGGCAGGACTACCTGAAGGGTGTGAGAATTTCGACATGGTAACATCAAGGGATATGATGAACAAAATGTTCCACACCATCAGAATGCTTCAGAAGTCAGCAGAGGAATTGTTTGAAGCACTAACACCAAAACCAAGTTGCATAATCTCCGACTTCTGCATTCCTTGGACCGCTCAGATAGCTGAAAAGTATCATATTCCAAGGATTTCATTCCACGGATTTTCTTGCTTCTGCCTCCATTGTCTGCACCAGCTACACACTTCAGAGGTTTGTGAAAGCATCACTTCAGAGTCCGAGTATTTCACTATTCCCGACATACCTGACCAAATTCAAGTTACCAAAGAGCAGTTACCAGGAGCACTCTCAATTGATTTGAAGGGCTTTGGAGACCAGTTGCGTGACGCTGAGAGAAAGACGTATGGGGTTATCATAAATACTTTTGAAGAGTTGGAGAAGGCGTATGTGAGGGATTACAAGAAGGTGAAAAATGATAAGATGTGGTGCATTGGTCCTGTTTCATTATGCAACAATGATGGTTTGGATAAGGCTGAAAGAGGCAATCGGGCCTCAATTAATGAGCACAATTGCTTGAAGTGGCTAGATTTGCAGCAACCTAAGTCAGTGGTCTATGTTTGTTTTGGAAGCTTATGCAACTTGATTCCTTCACAGCTTGTGGAGTTGGCCTTGGCCTTGGAAGATACTAAAATACCATTTGTATGGGTTATTAGGGAGGGAAGTAGGTTCCAAGAACTGGAAAAGTGGATCTCTGAAGAAGGGTTTGAGGAAAGGACGAAAGGGAGAAGCCTTATAATAAGAGGTTGGGCACCACAAGTAATAATACTATCACACCCTTCCATTGGAGGATTCTTAACACACTGTGGTTGGAATTCAACACTTGAAGGGATAAGTGGTGGAGTGCCACTGGTTACCTGGCCTCTATTTGGTGATCAGTTTTTAAATGAGAAGCTTGTTACTGATGTGTTGAAGATTGGAGTGAGCGTTGGAGTAGAGGTTCCCTTGATGTGGGGAGAAGAAGAGAGGAGAGGTGTGTTGGTGAAGAAGGAGGATATTGGGAGGGCAATATGTAGAGTGATGGATGAAGATGGAGAAGAAAGCAAAGAGAGAAGAGAAAGAGCAAGAGAATTGAGTGAGATGGGAAAGAGAGCGATGGAAAAAGGTGGCACTTCTCATCTTGGCATCACTTTGCTTATTCAAGACATTATACAAAATTCAACTGCTCAGGCTCAAGAATCGCATCTTACATGCTCTGCTTGA 1497 0.4322 MLSQTTNLHFVLFPLMSQGHMIPMMDIARLLAHRGVVVTIFTTPKNASRFNSVLSRALSSGLQIRFLQLHFPAKEAGLPEGCENFDMVTSRDMMNKMFHTIRMLQKSAEELFEALTPKPSCIISDFCIPWTAQIAEKYHIPRISFHGFSCFCLHCLHQLHTSEVCESITSESEYFTIPDIPDQIQVTKEQLPGALSIDLKGFGDQLRDAERKTYGVIINTFEELEKAYVRDYKKVKNDKMWCIGPVSLCNNDGLDKAERGNRASINEHNCLKWLDLQQPKSVVYVCFGSLCNLIPSQLVELALALEDTKIPFVWVIREGSRFQELEKWISEEGFEERTKGRSLIIRGWAPQVIILSHPSIGGFLTHCGWNSTLEGISGGVPLVTWPLFGDQFLNEKLVTDVLKIGVSVGVEVPLMWGEEERRGVLVKKEDIGRAICRVMDEDGEESKERRERARELSEMGKRAMEKGGTSHLGITLLIQDIIQNSTAQAQESHLTCSA* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1887 498 CDD GT1_Gtf-like 8 460 IPR002213 GO:0008194
Pvu1g1887 498 MobiDBLite consensus disorder prediction 441 464 - -
Pvu1g1887 498 Gene3D Glycogen Phosphorylase B; 272 465 - -
Pvu1g1887 498 PANTHER GLYCOSYLTRANSFERASE 5 488 - -
Pvu1g1887 498 Gene3D Glycogen Phosphorylase B; 1 271 - -
Pvu1g1887 498 PANTHER GLYCOSYLTRANSFERASE 5 488 - -
Pvu1g1887 498 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 276 400 IPR002213 GO:0008194
Pvu1g1887 498 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 2 482 - -
Pvu1g1887 498 ProSitePatterns UDP-glycosyltransferases signature. 348 391 IPR035595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1887 Pvu-Chr1 44723223 44725216 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1887 8 489 Glycosyltransferase AT2G36760 55.876 0.0 581
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1887 K13496 K22771 gmx:100802029 816.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1887 1 44723223 44725216 Pvu7g1571 7 37522293 37524226 PCT