Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1884 CGGTTTGGGAACATGGCTGGAGTTTTCCAAGTGATGGCGTTCGGAGTTCGGGCTCTTGACAAAAGAGACGTCGATTCTGCTTTCATGGCGAAGCTCGCTAAGATTGCTACCGCTGAGCTAATATCCTCTAAGGAACTAAATTCTGACTGGCAACGAGCAGCAACAAGCCTACTTGTTGCAATAGGCTCACATTTACCTGATCTCATGATGGAAGAAATTTTTCTTCATTTATCTGGGACAAATTCAGCACTACAGGCTATGGTTCAAATCCTTGCAGAATTTGCTTCTACTGATCCCATGCAGTTCATTCCACGTTGGAAAGGTGTACTTTCACGAATTTTGCCAATTCTTGGAAATGTACGGGAAATGCATCGCCCTATTTTTGCAAATGCATTTAAGTGTTGGTGTCAAGCTTCTTGGCAATATAGTATAGACTTTCCTTCACATTTTCCTCAAGATGGTGATGTCATGTCATTTCTAAATTCTGCTTTTGAGCTTTTGTTGAGAGTTTGGGCAGCTTCGAGAGACCTTAAGGTTCGTGTGGCATCTGTAGACGCACTGGGGCAGATGGTAGGCCTCATAACACGAGCTCAGTTAAAGACTGCCCTACCAAGGCTTATCCCTACAATATTGGACTTGTATAAAAAGGATCAAGATATAGCTTTTTTGGCTACATGTAGTCTCCACAATCTGTTAAATGCCTCTTTACTGTCTGAAAGTGGCCCTCCTATGCTTGATTTTGAGGATTTGACTCTTGTTTTATCAACACTTCTACCTGTGATTTCTATCAATAATGACAGCAAAGACCAATCAGATTTCTCTTTGGGACTAAAGATGTATAATGAGGTTCAGCATTGCTTTCTGACAGTCGGCTTGGTGTATCCAGATGATTTGTTTTTGTTCCTTGTAAATAAATGCAGACTGAGGGAAGAACCATTGACTTTTGGTGCTCTTTGCATTTTGAAGCATCTTTTGCCAAGGCTGTCGGAAGCTTGGCATAGTAAAATATCTCTACTAGTCGAAGCTGTAAAGTCCTTGCACGAGGAGCAGAATTTAGCTGTTCGAAAGACACTATCTGAGTTAATTGTGGTTATGGCTTCTCACTGTTACTTGGTTGGTTCGTCTGGAGAGTTGTTCATTGAATATCTTGTACGCCATTGTGCTATAACTGATCAAAATCGGAGTGATCTTGAGAAGATACCAAATAAGAGAAAAGAGATGAAAATTGGAGCGGTTACTCCCAGTGAGTTAAGAGCAGTTTGTGAAAAAGGTCTGCTTTTGGTAACTATTACGATTCCTGAAATGGAGCATATTCTTTGGCCTTTTCTGTTGAGGATGATTATTCCACGAACCTACACTGGTGCTGTGGCCACGGTGTGCAGGTGTATCTCAGAATTGTGGCGTCATAGGTCCTTTAGCAATGATATGTTGAGTGATTGTAAAACTCGTCCTGATATACCAACTGCTGAGGAACTTCTTGCCCGCTTGGTGGTGCTTTTGCATAATCCGCTGGCAAGGGAGCAATTGGCCACCCAAATTTTGACAGTTCTATGTCTTTTGGCACCTCTATTCCCAAAAGATATTAATTTGTTTTGGCAAGAGGAGATTCCAAAGATGAAGGCATATGTTAGCGATACAGAGGACTTGAAACAGGATCCGTCGTATCAAGACACTTGGGATGACATGATAATCAATTTTCTTGCAGAATCTTTGGATGTGATCCAAGATGCTGATTGGGTTATGTCTTTTGGAAATGTTTTTGCCAGACATTATGAACTTTATGCCTCTGATGATCAACACACTGCGCTTCTGCACCGGTGCCTAGGCATTCTGCTTCAAAAGGTTAACGAAAGAGCTTATGTCCGTGATAAAATAGATTGGATGTACAAGCAGGCAAACATTGCAAATCCAACAAATAGACTTGGATTGGCAAAAGCAATGGGACTGGTTGCTGCATCACATTTGGATACAGTGTTGGACAAGCTGAAGGACATTTTAGACAATGTTGGACAAGGCGTATTTCAGAGGATACTGTCATTATTCTCTGATAGTTTCAGAACAGAAGACTCTGATGACATTCATGCCGCTTTGGCACTAATGTATGGATATGCTGCAAAGTATGCCCCATCAACAGTTATTGAAGCCAGAATAAATGCCCTTGTTGGCACCAATGTGCTTTCACGACTTCTTCATGTGCGTCATCCCAAAGCAAAACAGGCTGTCATCACAGCAATTGATTTACTAGGTAATGCTGTCATTAATGCTGCTGAAAATGGCTCACCGTTTCCACTGAAAAGAAGGGACCAACTGCTCGATTATATTTTAACTTTAATGGGTCGGGATGACGAAGATGGTTTTGCTGATTACAATGACCTATTGCGTACTCAGGCCCTTGCTATTAGTGCCTGCACCACGTTGGTCTCTGTAGAACCAAAGCTAACATTTGAAACTAGGAACCATGTAATGAAGGCCACGTTGGGGTTCTTTGCTATACCAAATGATCCGGTTGATGTTGTCAATCCCCTTATAGACAACTTGATCACCCTTTTATGTGCAATTCTACTCACTGGTGGAGAAGATGGAAGAAGTCGGGCAGAGCTACTAATGCTTATCTTGAGGCAAATTGATCAATTTGTCTGTTCACCCATTGAGTATCAGAGGAAAAGAGGTTGCCTTGCTGTACATGAGATGCTTCTAAAGTTTCGGATGATTTGTGTTAGTGGGTATTGTGCACTGGGCTGCCATGGGAGTTGTGCACATAACAAGCAAATTGACCGAACTCTGTTTGGGAATTTTTCAAAGCTACCATCTGCGTTTGTACTACCAAGTCGAGAATCTTTGTGCTTGGGAGATAGGGTAATCATGTATCTTCCACGTTGTGCAGACCCAAATTCTGAAGTCCGAAAAATATCAGCACAAATTCTTGATCTACTCTTTAGCATCTCTCTTTCGCTTCCAAGACCTGCAGGGTCATCTATGTCTGCTGAGGTTATAGAATTGTCATACAGCGCATTATCTTCTCTTGAGGATGTTATAGCCATATTGAGGAATGATACTTCTATTGATCCATCAGAAGTTTTCAACAGGATTGTTTCCTCCCTCTGCATTCTGTTGACAAAAGAGGAGATGGTTGCTACACTGCACGGTTGCTCAGTTGCTATATGTGATAAGATTAAGCAATCAGCTGAAGGGGCTATTCAAGCTGTTGTTGAATTTGTTACAAAGAGAGGGGGGGAATTGACTGAAATTGATATCTCAAGGACAACCCAATCATTGATCTCTGCTGTTGTGCATGCAACTGACAAGCATTTGCGTGTGGAAACTCTTGGAGCTATTTCTTCTTTGGCTGAAAACACTAGCCCAAAAACTGTTTTTGATGAAGTCCTGGCTACTGCTGGAAGAGATACAATCACAAAGGATATATCTAGGTTACGTGGAGGATGGCCCATGCAGGATGCATTCTATGTAAGTCTCATTGTTTTCCGTATGAACTTCGTTAATCCACTTTTGTACAGATTGCCCACTGTAAATGACAGAAATAAGTACAGTCAGAGGTTAAGACAGTTAGTTGGGTGGTTAAATGGGAGTAAGCTGTACAGTGAGGGATTGAAAAATAAGTTTCTTAGCCAATTTGAGTTTGTAAACTCTATTAGTATAGAAACAGTTGAAAGGAATAGAAAGAAATAG 3687 0.4139 RFGNMAGVFQVMAFGVRALDKRDVDSAFMAKLAKIATAELISSKELNSDWQRAATSLLVAIGSHLPDLMMEEIFLHLSGTNSALQAMVQILAEFASTDPMQFIPRWKGVLSRILPILGNVREMHRPIFANAFKCWCQASWQYSIDFPSHFPQDGDVMSFLNSAFELLLRVWAASRDLKVRVASVDALGQMVGLITRAQLKTALPRLIPTILDLYKKDQDIAFLATCSLHNLLNASLLSESGPPMLDFEDLTLVLSTLLPVISINNDSKDQSDFSLGLKMYNEVQHCFLTVGLVYPDDLFLFLVNKCRLREEPLTFGALCILKHLLPRLSEAWHSKISLLVEAVKSLHEEQNLAVRKTLSELIVVMASHCYLVGSSGELFIEYLVRHCAITDQNRSDLEKIPNKRKEMKIGAVTPSELRAVCEKGLLLVTITIPEMEHILWPFLLRMIIPRTYTGAVATVCRCISELWRHRSFSNDMLSDCKTRPDIPTAEELLARLVVLLHNPLAREQLATQILTVLCLLAPLFPKDINLFWQEEIPKMKAYVSDTEDLKQDPSYQDTWDDMIINFLAESLDVIQDADWVMSFGNVFARHYELYASDDQHTALLHRCLGILLQKVNERAYVRDKIDWMYKQANIANPTNRLGLAKAMGLVAASHLDTVLDKLKDILDNVGQGVFQRILSLFSDSFRTEDSDDIHAALALMYGYAAKYAPSTVIEARINALVGTNVLSRLLHVRHPKAKQAVITAIDLLGNAVINAAENGSPFPLKRRDQLLDYILTLMGRDDEDGFADYNDLLRTQALAISACTTLVSVEPKLTFETRNHVMKATLGFFAIPNDPVDVVNPLIDNLITLLCAILLTGGEDGRSRAELLMLILRQIDQFVCSPIEYQRKRGCLAVHEMLLKFRMICVSGYCALGCHGSCAHNKQIDRTLFGNFSKLPSAFVLPSRESLCLGDRVIMYLPRCADPNSEVRKISAQILDLLFSISLSLPRPAGSSMSAEVIELSYSALSSLEDVIAILRNDTSIDPSEVFNRIVSSLCILLTKEEMVATLHGCSVAICDKIKQSAEGAIQAVVEFVTKRGGELTEIDISRTTQSLISAVVHATDKHLRVETLGAISSLAENTSPKTVFDEVLATAGRDTITKDISRLRGGWPMQDAFYVSLIVFRMNFVNPLLYRLPTVNDRNKYSQRLRQLVGWLNGSKLYSEGLKNKFLSQFEFVNSISIETVERNRKK* 1229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1884 1228 PANTHER MAESTRO-RELATED HEAT DOMAIN-CONTAINING 1 1148 IPR045206 -
Pvu1g1884 1228 Gene3D - 23 219 IPR011989 -
Pvu1g1884 1228 SUPERFAMILY ARM repeat 50 669 IPR016024 -
Pvu1g1884 1228 SUPERFAMILY ARM repeat 310 1120 IPR016024 -
Pvu1g1884 1228 PANTHER MAESTRO HEAT-LIKE REPEAT FAMILY MEMBER 1 1 1148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1884 Pvu-Chr1 44646750 44671400 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1884 K24816 - gmx:100800961 2147.47