Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1879 ATGTCTGGCCCCGTGGCCATTGCAGATTATTCAAACGGAGCACTTTCTTGTGCAGACAGAACGAAATATGTTGATGTGCTTCCTGAATTAGACCAACCTTCTACATTGACAAACGGTGAAAGTGATGGCTTTAGTGTTGGGCAACTCTTACTTCCTAATGGAGAGTCATATTCTGGATCCCTTTATGGCAATGTTTATGAGGGTCATGGAACGTACGTTTGGTTTGATGGTTGTGTATATGAGGGTGAATGGAGGAGAGGTACGAGAAATGGGTATGGGAAGATAAGATGGCCTTCTGGAGCAGAGTATGAAGGTGATTTCTCTGGTGGATATATCCATGGAACGGGGAGATATATTCGTTCTGATAAATTGACCTATAAAGGTAGATGGCGGTTGAATCTTAAACATGGACTGGGGTATGAAGTTTATCCTAATGGAGATACCTTTGAAGGTTCTTGGATGCAAGGAACACCAGAGGGCCCTGGCAAGTATACCTGGACCAATGGAAATGTTTACGTAGGGAATATGAAAGGTGGGATAATGTCAGGAAAAGGAACACTCACCTGGATAAATGGGGACTCATATGAAGGCAACTGGTTAAATGGCATGATGCATGGATTTGGAGTTTACACTTGCAGTGATGGAGGATGCTATGTTGGGACTTGGGCATTTGGTCTAAAAGATGGCAAAGGAACCTTTTATCCAAGAGGTAGCCGGCTTCCATCAGTGCAAGAAATTTATCTCAGTGCCTTGAGAAAAAGAGGGCTATTGCCAGATTTGAGAAAACAAAAGCGAGTGAGAGATGTCGAGGTACCAGAAAATCAGCTGTCAAGTTATGGTTCATCTGATAAGCTTGCAAAAGGAAACCTGTTAAATCTGGAACAGTCTAATAGAAGAAATGTGTCTCTTGAAAGGCGTTGGAGTCTTGAGGTGTCGATTGAGAAAGTGATTGGATATGATTCAGCATTAGGATTAGCAGATTCTGTGCCAGAAAGTAGCGACAAAGAGGTTGATACAACGATCCCAATTTTGGAACGAGAGTACATGCAAGGTGTATTGATAAGTGAGGTTGTGTTAAATAACATGTTTTCATCAATGTCGAGAAGGGCAAGGCGACTTCAAAAAAAGCTTGCCAAAGAGACTAAAAGACCTGGTGAAATAATCATTAAAGGTCACAGGAGTTATGATCTAATGCTCAGTTTGCAGCTTGGAATAAGGTATACCGTGGGCAAGATAACACCTATACCTACGCGAGAAGTAAGAATATCAGATTTTGGTACCAAAGCAAGCTTTTGGATGAATTTTCCTAAAGAAGGTTCTCAATTAACACCTACCCATGCATCAGAGGATTTTAAATGGAAAGATTACTGCCCCATGGTGTTCAGAAATTTGAGAGAGATGTTCAAGATTGATGCTGCCGACTACATGATGTCCATTTGTGGAAACGATACTCTGAGGGAATTATCTTCTCCAGGGAAAAGTGGTAGTGTCTTTTTCCTGTCTCAGGATGATCGTTTCATGATCAAGACACTGCGAATGTCTGAAGTCAAGGTTCTTCTAAGAATGCTGCCAGACTATCATCATCATGTGAAGTCATACGAAAATACACTTATCACAAAATTCTTTGGCTTGCACAGGATTAAGCCTTCAAGTGGCCAGAAGTTTCGCTTCGTTGTAATGGGAAATATGTTCTGCACGGAACTGAGGATCCATCGGAGATTTGATTTAAAAGGTTCGTCCTTGGGACGATCATCAGACAAGATAGAAATTGACGAAAATACAACACTAAAAGATTTGGATCTGAACTACTGCTTCTACTTGGAACCGTCATGGCGGGAATCTTTATTAAAGCAGATTGAAATAGACAGCAAATTTTTAGAAGCACAACACATTATGGATTACAGCCTTCTTCTAGGTGTTCACTATCGAGCTCCACAGCATCTGCGTCCTCTCATATCATACAATCAAAGAAGAAGTGTGGATGGATTAGCAATTCTTGCAGAGGAAGATCCTCTGGAGGATGAAGCATCCTATCCACAAGGCCTTGTTCTAGTTCCTAGAGGAGCAGATGATAACAGTGTTGTTGTGGGCTCACATGTGAGGGGTAGTCGGTTGCGAGCTTCATCTGCTGGTGATGAGGAGGTGGATCTACTTCTACCTGGTACAGCAAGACTCCAAATCCAGCTTGGTGTGAACATGCCTTCAAGGGCAGAGCAGATTTCAGGAAAACAAGAACAACAAAAGTTGCACTCGGTGTACGATGTGGTGCTGTACCTGGGTATCATTGATATATTGCAGGACTATAACATGACCAAGAAGATTGAACATGCTTATAAATCTCTTCATTTTGATTCATTGTCTATATCAGCAGTAGACCCTACATTCTACTCTCATCGTTTCCTGGAGTTTATTCAGAAAGTGTTTCCACCAAATGCAATGGCAGGTTAA 2448 0.4175 MSGPVAIADYSNGALSCADRTKYVDVLPELDQPSTLTNGESDGFSVGQLLLPNGESYSGSLYGNVYEGHGTYVWFDGCVYEGEWRRGTRNGYGKIRWPSGAEYEGDFSGGYIHGTGRYIRSDKLTYKGRWRLNLKHGLGYEVYPNGDTFEGSWMQGTPEGPGKYTWTNGNVYVGNMKGGIMSGKGTLTWINGDSYEGNWLNGMMHGFGVYTCSDGGCYVGTWAFGLKDGKGTFYPRGSRLPSVQEIYLSALRKRGLLPDLRKQKRVRDVEVPENQLSSYGSSDKLAKGNLLNLEQSNRRNVSLERRWSLEVSIEKVIGYDSALGLADSVPESSDKEVDTTIPILEREYMQGVLISEVVLNNMFSSMSRRARRLQKKLAKETKRPGEIIIKGHRSYDLMLSLQLGIRYTVGKITPIPTREVRISDFGTKASFWMNFPKEGSQLTPTHASEDFKWKDYCPMVFRNLREMFKIDAADYMMSICGNDTLRELSSPGKSGSVFFLSQDDRFMIKTLRMSEVKVLLRMLPDYHHHVKSYENTLITKFFGLHRIKPSSGQKFRFVVMGNMFCTELRIHRRFDLKGSSLGRSSDKIEIDENTTLKDLDLNYCFYLEPSWRESLLKQIEIDSKFLEAQHIMDYSLLLGVHYRAPQHLRPLISYNQRRSVDGLAILAEEDPLEDEASYPQGLVLVPRGADDNSVVVGSHVRGSRLRASSAGDEEVDLLLPGTARLQIQLGVNMPSRAEQISGKQEQQKLHSVYDVVLYLGIIDILQDYNMTKKIEHAYKSLHFDSLSISAVDPTFYSHRFLEFIQKVFPPNAMAG* 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1879 815 SUPERFAMILY SAICAR synthase-like 390 808 - -
Pvu1g1879 815 PIRSF PIP5K_plant 13 812 IPR017163 GO:0005524|GO:0016308
Pvu1g1879 815 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 166 237 - -
Pvu1g1879 815 SMART PIPK_2 421 809 IPR002498 GO:0016307|GO:0046488
Pvu1g1879 815 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 380 562 IPR027484 -
Pvu1g1879 815 CDD PIPKc_AtPIP5K_like 394 807 - -
Pvu1g1879 815 Pfam MORN repeat 195 216 IPR003409 -
Pvu1g1879 815 Pfam MORN repeat 103 122 IPR003409 -
Pvu1g1879 815 Pfam MORN repeat 80 100 IPR003409 -
Pvu1g1879 815 Pfam MORN repeat 172 193 IPR003409 -
Pvu1g1879 815 Pfam MORN repeat 57 79 IPR003409 -
Pvu1g1879 815 Pfam MORN repeat 126 148 IPR003409 -
Pvu1g1879 815 Pfam MORN repeat 218 239 IPR003409 -
Pvu1g1879 815 Pfam MORN repeat 149 171 IPR003409 -
Pvu1g1879 815 Gene3D - 563 808 - -
Pvu1g1879 815 PANTHER PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 38 812 - -
Pvu1g1879 815 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 38 812 IPR023610 -
Pvu1g1879 815 Gene3D - 82 135 - -
Pvu1g1879 815 Gene3D - 151 201 - -
Pvu1g1879 815 Gene3D - 202 242 - -
Pvu1g1879 815 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 480 806 IPR002498 GO:0016307|GO:0046488
Pvu1g1879 815 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 391 808 IPR002498 GO:0016307|GO:0046488
Pvu1g1879 815 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 52 175 - -
Pvu1g1879 815 SMART morn 147 168 IPR003409 -
Pvu1g1879 815 SMART morn 124 145 IPR003409 -
Pvu1g1879 815 SMART morn 55 76 IPR003409 -
Pvu1g1879 815 SMART morn 193 214 IPR003409 -
Pvu1g1879 815 SMART morn 170 191 IPR003409 -
Pvu1g1879 815 SMART morn 78 99 IPR003409 -
Pvu1g1879 815 SMART morn 101 122 IPR003409 -
Pvu1g1879 815 SMART morn 216 237 IPR003409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1879 Pvu-Chr1 44599059 44605094 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1879 13 811 Acyl Lipid Metabolism Gene Families AT3G09920 73.243 0.0 1207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1879 K00889 - gmx:100800418 1501.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1879 1 44599059 44605094 Pvu1g1879 1 44599059 44605094 ECH
Pvu1g1879 1 44599059 44605094 Pvu7g1563 7 37392191 37407770 PCT