Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1874 ATGCAGCGAATTTCGATTGCAATTTCACTAATATCCATCTTATTTTGTTCCACATTAACTGGAGCTCTTCCCGAACCTGAGTATGGTTACGATAAAGATAGTGGAAATGGGCCTGAATACTGGGGTGATATTAAAGAAGCATGGGCAGACTGTAAAATAGGGCAAACGCAATCTCCTATTGATTTGTCAAGTAACTGTGTTCAAGTGATCCCAGAGTTAGGGAGTCTGGTGTACTGGACCTATAACCCTCAATATGCTACTGTCTCCAACAGAGGTCATGATGTTGCAGTGGAGTGGGGAGGGGGTGCAGGCTCAATAGACATAGATGGATCACCTTTCTTCCTCATACAAGCCCATTGGCACTGGCCCTCCGAACATACCATCGACGGCCAAAGGTATGACTTGGAGTTGCACATGGTGCATGTTAGCCCACAGCCTGATGGAACAAACAAGACTGCTGTTGTTGGTATTTTGTACAACTACGGTTCTCCTGATCCATTGCTCTCTAAGTTGGAAGAATACCTAATGGACATTCCCCAAGAAGACGAAGAGAAAAGTATAGGGGAGATTGATCCCTCAGAGATCATGATGGGTAGCACGATGTTCTACAGGTATATAGGATCACTCACTGCACCTCCTTGCACCGAAGGCATCATTTGGACCATTGATAAGAAGATAAGAACTGTTTCAAGAATACAAGTGGAGCTACTGAAGAATACTGTACTTGAATATTATGCTATAAGGACTGCAAGGCCGCTACAGCCTCTAAATGAGAGGAAGATACAACTCTACGTTTCAAAGTATTAG 807 0.4374 MQRISIAISLISILFCSTLTGALPEPEYGYDKDSGNGPEYWGDIKEAWADCKIGQTQSPIDLSSNCVQVIPELGSLVYWTYNPQYATVSNRGHDVAVEWGGGAGSIDIDGSPFFLIQAHWHWPSEHTIDGQRYDLELHMVHVSPQPDGTNKTAVVGILYNYGSPDPLLSKLEEYLMDIPQEDEEKSIGEIDPSEIMMGSTMFYRYIGSLTAPPCTEGIIWTIDKKIRTVSRIQVELLKNTVLEYYAIRTARPLQPLNERKIQLYVSKY* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1874 268 ProSiteProfiles Alpha-carbonic anhydrases profile. 26 265 IPR001148 -
Pvu1g1874 268 SMART Carb_anhydrase_2a 28 265 IPR001148 -
Pvu1g1874 268 PANTHER CARBONIC ANHYDRASE 3 267 IPR023561 GO:0004089|GO:0008270
Pvu1g1874 268 PANTHER EUKARYOTIC-TYPE CARBONIC ANHYDRASE 3 267 - -
Pvu1g1874 268 SUPERFAMILY Carbonic anhydrase 27 261 IPR036398 -
Pvu1g1874 268 Gene3D Alpha carbonic anhydrase 25 267 IPR036398 -
Pvu1g1874 268 Pfam Eukaryotic-type carbonic anhydrase 37 262 IPR001148 -
Pvu1g1874 268 ProSitePatterns Alpha-carbonic anhydrases signature. 124 140 IPR018338 GO:0004089|GO:0008270
Pvu1g1874 268 CDD alpha_CA_prokaryotic_like 37 263 IPR041891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1874 Pvu-Chr1 44529218 44531359 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1874 K01674 - gmx:100799362 429.483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1874 1 44529218 44531359 Pvu7g1556 7 37311174 37313967 PCT
Pvu7g1558 7 37331674 37335107 Pvu1g1874 1 44529218 44531359 PCT