Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1869 ATGGCGATACATTTATACAAAACTTCTACCCCAAGCACACGCAATGGAGCCGTAGACAGTAAAGTAAAATCCAATCCACGAAATCATTTGATCTATGGACAACATCGTTGTGGTAAAGGCCGTAATGCCAGAGGAATAATTACCGCAGGGCATAGAGGGGGAGGTCATAAGCGTCTATACCGTCAAATTGATTTTCGATGGAATGAAAAAAACATATATGGTAGAATCGTAACCATAGAATATGACCCTAATCGAAATGCATCCATTTGTCTCATACACTATGGGGATGGTGAGAAAAAATATATTTTACACCCCAGAGGGGCTATAATTGGAGATACCATTGTTTCTGGTACAGAAGTTCCAATAAAAATGGGAAATGCCCTACCTTTGAGTGCGGTTTGA 402 0.4005 MAIHLYKTSTPSTRNGAVDSKVKSNPRNHLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRQIDFRWNEKNIYGRIVTIEYDPNRNASICLIHYGDGEKKYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAV* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1869 133 SMART Ribosomal_L2_2 40 116 IPR002171 GO:0003735|GO:0005840|GO:0006412
Pvu1g1869 133 SUPERFAMILY Nucleic acid-binding proteins 2 123 IPR012340 -
Pvu1g1869 133 PANTHER RIBOSOMAL PROTEIN L2 3 132 IPR002171 GO:0003735|GO:0005840|GO:0006412
Pvu1g1869 133 MobiDBLite consensus disorder prediction 1 22 - -
Pvu1g1869 133 Gene3D - 1 112 IPR012340 -
Pvu1g1869 133 PANTHER 50S RIBOSOMAL PROTEIN L2, CHLOROPLASTIC 3 132 - -
Pvu1g1869 133 Pfam Ribosomal Proteins L2, RNA binding domain 40 116 IPR022666 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1869 Pvu-Chr1 44489506 44490616 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1869 K02886 - gmx:3989255 265.774