Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1868 ATGGATGAAGGAACTAAGAGAATGGAAGAAGGCCTCAATTCACCATTAAATGATGAGGGTGATAATAAGGATGGCTTGAAGAAGCAGGTAACCATTAGAAGCAGTAAAGGAGGTTCTACAGTTGAGCGTGACAAAGACACAATGGCTAAGCCTGTGGCTGTGGATGAGTTAGAGGAGCAACCACTGGTTAAGAAGAAGACCAAGAGGGTTGCAACCCTGGATGCATTTAGGGGTCTAACCATAGTGTTGATGATACTGGTAGACGACGCTGGTGAAGCTTATCCACGCATTGATCACTCCCCATGGAATGGATGTACTTTGGCCGATTTCGTTATGCCTTTCTTTCTTTTCATTGTTGGGGTTGCCATAGCCCTTGCACTCAAGAGAATCCCCAAGATCAGGAATGCTGTAAAGAAGATAATCCTTAGGACAATGAAGCTTCTCTTCTGGGGTGTAATTTTGCAAGGGGGTTACTCTCATGCTCCTAATGATCTCGAATATGGAGTTAACATGAAATTTATCCGATGGTTTGGTATTCTCCAGAGAATAGCTCTTGTATACTGTGTTGTAGCTCTAATAGAGACATTTACCACCAAGCTTAAACCCACAACGTTGGGTTCTGGATACCTATCCATTTTTACTGCTTATAAATGGCAATGGCTTGGAGGGTTTGTGGCATTTCTCATTTATATGATCACAACCTTCACCCTCTATGTTCCTGATTGGAGTTTCGTGGATCGTTTTAACGGCGATGAACCGAAGAGATACACGGTCATTTGTGGGATGAGAGGACACCTAGGGCCTGCATGCAACGCTGTTGGACACGTGGACCGACAGGCGTGTACACTCAGTTCTCCTGGAGATGGTACTTTACGTGAAGATGCTCCAAGTTGGTGTCGTGCTCCTTTTGAACCTGAAGGCTTGTTGAGTTCTATATCAGCTATTCTCTCTGGCACTATCGGGATCCACTATGGACACGTCTTGATTCACTTCAAGGGTCATTCGGAGAGGCTAAAACAATGGGTCTCAATGGGGTTTGTGTTGCTCATAATAGCCATCATCCTTCACTTCACAGATGCTATCCCAATTAACAAGCAACTCTACAGTTTCAGCTATGTTTGTTTCACAGCTGGGGCAGCTGGAATTGTTTTCTCTGGGTTCTACATACTGATTGATGTTTGGGGGCTCCGGACTCCATTTTTGTTCTTGGAATGGATAGGAATGAATGCTATGCTAGTGTTTGTGATGGCAGCTGAGGGCATCTTTGCAGCTTTTGTAAATGGATGGTATTATGAAGATCCACGTAACTCTCTAGTACACTGGATCGAGAAGCATGTGTTTGTCAATGTTTGGCACTCAGAGAGGGTGGGAACCATCTTGTATGTCATCTTTGCAGAAATCACATTCTGGAGTGTGGTTGCTGGCGTCTTGCACAAATTAGGAATATATTGGAAACTATAA 1461 0.4401 MDEGTKRMEEGLNSPLNDEGDNKDGLKKQVTIRSSKGGSTVERDKDTMAKPVAVDELEEQPLVKKKTKRVATLDAFRGLTIVLMILVDDAGEAYPRIDHSPWNGCTLADFVMPFFLFIVGVAIALALKRIPKIRNAVKKIILRTMKLLFWGVILQGGYSHAPNDLEYGVNMKFIRWFGILQRIALVYCVVALIETFTTKLKPTTLGSGYLSIFTAYKWQWLGGFVAFLIYMITTFTLYVPDWSFVDRFNGDEPKRYTVICGMRGHLGPACNAVGHVDRQACTLSSPGDGTLREDAPSWCRAPFEPEGLLSSISAILSGTIGIHYGHVLIHFKGHSERLKQWVSMGFVLLIIAIILHFTDAIPINKQLYSFSYVCFTAGAAGIVFSGFYILIDVWGLRTPFLFLEWIGMNAMLVFVMAAEGIFAAFVNGWYYEDPRNSLVHWIEKHVFVNVWHSERVGTILYVIFAEITFWSVVAGVLHKLGIYWKL* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1868 486 MobiDBLite consensus disorder prediction 1 30 - -
Pvu1g1868 486 Pfam Heparan-alpha-glucosaminide N-acetyltransferase, catalytic 69 199 IPR012429 -
Pvu1g1868 486 PANTHER LD22376P 1 486 - -
Pvu1g1868 486 PANTHER HEPARAN-ALPHA-GLUCOSAMINIDE N-ACETYLTRANSFERASE-LIKE PROTEIN 1 486 - -
Pvu1g1868 486 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1868 Pvu-Chr1 44479903 44483270 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1868 K10532 - gmx:100819967 873.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1868 1 44479903 44483270 Pvu1g1868 1 44479903 44483270 ECH
Pvu1g1868 1 44479903 44483270 Pvu7g2226 7 45521226 45527636 PCT
Pvu7g1552 7 37199560 37204327 Pvu1g1868 1 44479903 44483270 PCT