Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1867 ATGGGGATACTGCACGACGACGTAGTGATTATCAGGGAGGCTGAGAAAGAAGGTGAAACCACCGTCATAACTGTAAACTGCCCTGACAAGACCGGTCTGGGTTGTGATTTGTGTCGTATAATTCTCTTCTTCGGTCTTAGCATTGTACGAGGAGATGTGTCCACTGACGGAAAATGGTGCTACATAGTTTTCTGGGTGGCGGGAAAGCAAAGGACCAGGTGGAGTTTGTTGAAGAAGAGGCTAATTGAGGCGTGTCCTTCTTGTTCCTCAGCTTCTGGGATTTCATATTACCGTTCAGAATTGAAGCCTCCTAAACCTTCTGATGTGTTCCTCTTGAAATTTTGTTGTCATGATAGAAAAGGCCTTTTACATGATATTACAGAGGTTCTTAGTGAGCTAGAGCTCATCATACACAAAGTGAAGATTTCTACTACACCTGATGGCAGAGTGGTGGATCTGTTTTTCGTCACGGATACCAGGGAACTTCTACATACAAAGAAGAGAAGGGACGACACAATTGAACAGTTGTTAGTTATTTTGGGGGATCCCTCAATTACCATTGACATTGAATTGGTTGGTCCGGAAATTACTGCTTGTTCTCAATCATCTTCGTTCCTTCCAAGTGCAATCACAGAAGATATCTATGATTTGGAATTACCTGATTCATTACAAAGCGGGACTTCCACATCTGATTCTGTTTCTATTGCAATAGACAATTCGTTGAGTCCTGCTCATACGCTTGTCCAAATTATATGTCAAGATCACAAAGGTCTTCTTTATGACATCATGAGAACTCTGAAGGATTACAATATTCAGATTTCTTACGGGAGATTCTCAACAAAACCCAGAGGAAAATGTGAGCTTGACTTGTTCATAGTGCAAGCAGACGGGAAAAAAATAGTTGACCCCAGCAAGCAGAAGTCTTTGTCATCACGCCTTAGGATTGAACTACTCCGTCCCTTCAGAGTAACTGTTGTAAGCAGGGGCCCTGATACGGAGCTGTTGGTTGCAAACCCTGTGGAGTTATCTGGCAAAGGACGACCCCTTGTTTTTTATGATATTACTCTTGCTCTCAAAATGCTTGGCCCCTCAATCTTTTCGGCTGAAGTTGGAAGACACGTGATTGGAGATCGGGAGTGGGAAGTTTATAGAATCTTGCTTGATGAGGGGGAGGGCTTATCTGTTCCGAGAAACAAGATTGAGAAAGGAGTTTGGAAGATGTTGATGGGTTGGGTGTGA 1239 0.431 MGILHDDVVIIREAEKEGETTVITVNCPDKTGLGCDLCRIILFFGLSIVRGDVSTDGKWCYIVFWVAGKQRTRWSLLKKRLIEACPSCSSASGISYYRSELKPPKPSDVFLLKFCCHDRKGLLHDITEVLSELELIIHKVKISTTPDGRVVDLFFVTDTRELLHTKKRRDDTIEQLLVILGDPSITIDIELVGPEITACSQSSSFLPSAITEDIYDLELPDSLQSGTSTSDSVSIAIDNSLSPAHTLVQIICQDHKGLLYDIMRTLKDYNIQISYGRFSTKPRGKCELDLFIVQADGKKIVDPSKQKSLSSRLRIELLRPFRVTVVSRGPDTELLVANPVELSGKGRPLVFYDITLALKMLGPSIFSAEVGRHVIGDREWEVYRILLDEGEGLSVPRNKIEKGVWKMLMGWV* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1867 412 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 2 411 IPR040217 -
Pvu1g1867 412 Pfam ACT domain 112 168 IPR002912 -
Pvu1g1867 412 SUPERFAMILY ACT-like 244 298 IPR045865 -
Pvu1g1867 412 ProSiteProfiles ACT domain profile. 111 194 IPR002912 -
Pvu1g1867 412 ProSiteProfiles ACT domain profile. 247 330 IPR002912 -
Pvu1g1867 412 SUPERFAMILY ACT-like 107 182 IPR045865 -
Pvu1g1867 412 SUPERFAMILY ACT-like 18 81 IPR045865 -
Pvu1g1867 412 PANTHER FOUR ACT DOMAIN ACT DOMAIN PROTEIN WHICH PROTEIN 2 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1867 Pvu-Chr1 44474612 44477792 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1867 - - gmx:100818216 770.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1867 1 44474612 44477792 Pvu1g1867 1 44474612 44477792 ECH
Pvu1g1867 1 44474612 44477792 Pvu7g1551 7 37194131 37197611 PCT