Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1845 ATGGCGTCCGAAGGCATTATTCTCGGCATGGGAAACCCTCTCCTCGATATCTCCGCCATCGTCGACTCCGAGTTCTTGAAAAAGTACTCTCTCACCTTGAACAATGCGATTCTTGCGCACGACAAGCACAAACCTATATATGAAGAATTGGTTGAGAAGTATAACGTGGAGTACATTGCTGGAGGTTCTACTCAGAATTCAATCAAGGTTGCTCAGTGGATGCTCCAAGTTCCTGGTGCAACAAGTTTCATGGGTGGCATTGGAAATGATAAGTTTGGGGAAGAGATGAAGAAGAGCTCAAAGCTGGCTGGTGTAAATGTTCACTATCATGAAGATAAAGCTACACCTACTGGAACTTGTGCTGTTTGTATAGTTGGTGGCGAAAGGTCGCTTGTGGCAAACTTAGCAGCTGCAAATTGCTACAAGTCTGAGCATTTGAAGAAACCAGAAAATTGGGCCCTAGTTGAAAAAGCCAAATATATTTATATTGCTGGCTTTTTCCTCACTGTATCACCAGATTCCATCCTGTTAGTTGCTGAGCATGCTGCTGCAAATAAAAAGCTCTTCTCGATGAACCTTTCTGCCCCTTTCATCTGTGAGTTATTTAGGGAGAGGCTGGAGAAAGCTCTACCGTATACAGATTTTGTTTTTGGAAATGAGACTGAAGCAAAAACATTTTCTAAAGTTCAAGGCTGGGAGACTGAAAATGTCGAGGAGATAGCTCTAAAGATTTCCCAGTGGCCAAAGGTGTCAGGAACGCATAAAAGGATAACAGTTATCACACAGGGTGCGGATCCTGTATGTGTTGCTGAGGATGGGAAGGTGAAAAAGTTCCCCGTGGAACTTTTGCCTAAAGAGAAACTAGTTGACACAAACGGAGCAGGAGATGCATTTGTTGGAGGATTTCTTTCACAATTGATTCAGGAGAAGCCCATTGAAGAATGTGTGAGAGGTGGCTGTTATGCAGCAAACGTTATCATCCAAAGATCTGGCTGCACTTACCCAGAGAAGCCTGATTTTCATTGA 1026 0.4347 MASEGIILGMGNPLLDISAIVDSEFLKKYSLTLNNAILAHDKHKPIYEELVEKYNVEYIAGGSTQNSIKVAQWMLQVPGATSFMGGIGNDKFGEEMKKSSKLAGVNVHYHEDKATPTGTCAVCIVGGERSLVANLAAANCYKSEHLKKPENWALVEKAKYIYIAGFFLTVSPDSILLVAEHAAANKKLFSMNLSAPFICELFRERLEKALPYTDFVFGNETEAKTFSKVQGWETENVEEIALKISQWPKVSGTHKRITVITQGADPVCVAEDGKVKKFPVELLPKEKLVDTNGAGDAFVGGFLSQLIQEKPIEECVRGGCYAANVIIQRSGCTYPEKPDFH* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1845 341 Gene3D - 15 134 - -
Pvu1g1845 341 PRINTS Adenosine kinase signature 66 75 IPR001805 GO:0004001|GO:0006166
Pvu1g1845 341 PRINTS Adenosine kinase signature 83 97 IPR001805 GO:0004001|GO:0006166
Pvu1g1845 341 PRINTS Adenosine kinase signature 114 129 IPR001805 GO:0004001|GO:0006166
Pvu1g1845 341 PRINTS Adenosine kinase signature 152 178 IPR001805 GO:0004001|GO:0006166
Pvu1g1845 341 PRINTS Adenosine kinase signature 261 280 IPR001805 GO:0004001|GO:0006166
Pvu1g1845 341 PANTHER - 1 340 IPR001805 GO:0004001|GO:0006166
Pvu1g1845 341 Pfam pfkB family carbohydrate kinase 28 335 IPR011611 -
Pvu1g1845 341 CDD adenosine_kinase 4 335 - -
Pvu1g1845 341 SUPERFAMILY Ribokinase-like 7 334 IPR029056 -
Pvu1g1845 341 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 290 303 IPR002173 GO:0016773
Pvu1g1845 341 PANTHER ADENOSINE KINASE 2-LIKE ISOFORM X1 1 340 - -
Pvu1g1845 341 Gene3D - 8 327 IPR029056 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1845 Pvu-Chr1 44189882 44193807 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1845 K00856 - gmx:100810561 632.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1845 1 44189882 44193807 Pvu1g1845 1 44189882 44193807 ECH
Pvu1g1845 1 44189882 44193807 Pvu7g1546 7 36947919 36952701 PCT