Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1830 ATGGGTGGGGGCCGGTTCAATCCAACGCAGATGGGGAAAAGGGTTCCGAAGAGGGTCTGGTTAAGCTTCCAAAATTCAATGGGAGTCCTCGTGGGTGGAAACCATACCTCCTCCAGGCGCGTCCTTCTACGCTCCATACTCCTCGCCTGCGCCATCTCCGTGGTCTCTCTCTACCGCGCGCAATCCCTCTTCGATTTCGCTCCTATCGCCACCTACTTCGATTGCGTTTCCGGTTTCTATGGCGTCACTTTCCGCCCCGCTTCTCAATTGCTCCGAACCCGCTTCTGGGTCCCTTCCAATTGCGAGAAAGACGCCAACTTGACCCTCACCGTGGTCACGGACCTCACCGCTAACCGGTGGCTTCACCCCGGAGCGAAGAGCCTCTGCGTTGGAGAAGGCTCTTTAATGGCCGTCGCGACAATGAAACAGTTAGGTTTCTCCGCCGTAAGCGCCGTCCAAACGCGCAGTTTCGAGCAGAAGGAGGTCCTGTACGAGGATTCTTCCTTCGATTTCGTGTTTTCCAGGGACCTCGACAAGGTTTCTGTGCCTGCTCTGTTGGTTCTCGAGGTTGAGCGTGTTCTTAAGCCTGGAGGGATTGGTGCCCTTATTGTAGGTACCTCTGGTTCGCATCCCAATGATTTAATAAGGGCAGCCACCCCTGTTTCCTCTTTGTTAAGGTCTTCCAATGTGGTGCATGTTGATTATGTGAATGAGCTTAACCTTGTTGTTTTCAAGAAAAGATTTGAAAATACTACTTCGTTTTACCAACATAGTTTACCCGCTGATTGTCCCAGTCTCACCTTCACCAAACCCCTCGTAGAGTTGATGGAGCCTCTCGTGAGTGAAAAACAAAAATCACCAGCTCCTGAGTTTCAGAAGAACATTCCCTATTTGCCTAAGTTTGTGGATGTTTCCACTAGGAAGAGGTTGGTGTATATTGATATTGGGGTGGGGGAGCTTCTTAATGCCAATGTTAGTGATTGGTTCCTGCCATCGTACCCTATTGATCAGAAAGATTTCAATGTGTACTTTGTTCACTACAACACTTCCATTATGTTGTCCTATGTGAAGCGACCTGGTATTACCTTTGTTTATCACCCTGGCTTGGCTGGTATTGGGAAGGGCACATCTAAGCTTGGAACGGATGATAATGATGATGACCTGGATTCTTTCCTTGGGGAGGAGGAGTTTGATTTCCTTGCCTGGTTCAGAGAAACTGTGCAATATGCTGATTTTGTGGTCCTCAAGATGAATGCAGGAAATGTTGAACTCAAGTTCCTCTCGGATATATTTGAGAATGGAGCTATATGCTTTGTTGATGAGTTGTTTCTCAAGTGTCCCGAGAGGGGAGGTGATGATAAAAGTGTAACCAGCAAGGAAAGTTGTATGGATATTTACAAGGGTCTCAGAAGCAATGGTGTCTATGTCCATCAATGGTGGGGAGACTAA 1449 0.4817 MGGGRFNPTQMGKRVPKRVWLSFQNSMGVLVGGNHTSSRRVLLRSILLACAISVVSLYRAQSLFDFAPIATYFDCVSGFYGVTFRPASQLLRTRFWVPSNCEKDANLTLTVVTDLTANRWLHPGAKSLCVGEGSLMAVATMKQLGFSAVSAVQTRSFEQKEVLYEDSSFDFVFSRDLDKVSVPALLVLEVERVLKPGGIGALIVGTSGSHPNDLIRAATPVSSLLRSSNVVHVDYVNELNLVVFKKRFENTTSFYQHSLPADCPSLTFTKPLVELMEPLVSEKQKSPAPEFQKNIPYLPKFVDVSTRKRLVYIDIGVGELLNANVSDWFLPSYPIDQKDFNVYFVHYNTSIMLSYVKRPGITFVYHPGLAGIGKGTSKLGTDDNDDDLDSFLGEEEFDFLAWFRETVQYADFVVLKMNAGNVELKFLSDIFENGAICFVDELFLKCPERGGDDKSVTSKESCMDIYKGLRSNGVYVHQWWGD* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1830 482 PANTHER PEPTIDE UPSTREAM PROTEIN 29 482 - -
Pvu1g1830 482 Pfam Methyltransferase domain 155 199 IPR013216 GO:0008168
Pvu1g1830 482 PANTHER UPSTREAM ORF PROTEIN, PUTATIVE-RELATED 29 482 - -
Pvu1g1830 482 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 138 208 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1830 Pvu-Chr1 44011689 44013703 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1830 - - gmx:100806816 739.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1830 1 44011689 44013703 Pvu7g2274 7 46049573 46051021 PCT