Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1828 ATGAGGGCCTCTTGCCACCTTATACTAATTGCAACCTTTCACCTAACCTTTTACCTATCCAATCTCCATGCACCCTCTTCTTCATATATATATTACAACACCACATCTCTTCTTCCACTTGTAACAAACATCTTGGTCTTCTTCTTAGCTTCTTTCCTCACACCAATGGCAAAGCTATTCCATTTCCTCCTTCTCCTCTTCATCCAAACAATATCAGCCCAAGTAGCACCAGCACCAGCAGGACCCACCAACATCACCCAGGTCCTAGAGAAAGCAGGCCAATTCACAACCTTCATCAAACTTCTCAAAGCCACACAAACAGCTGACAGACTCAATTCACAGCTCAACAACTCAAACCAAGGCCTAACTGTGTTTGCACCCACTGACAATGCTTTCACAAGCCTAAAAGCAGGAACACTAAACTCCATAAACTCACAAGACCAAATGCAGTTGGTGCAGTTTCACATCCTCCCCACTCTCTACACCATCTCACAGTTCCAAACCGCCAGTAACCCTTTGCACACGCAAGCTGGGAACAGTGACGACGGAGAGTACCCTCTCAACGTGACCACCTCAGGGAACCAAGTCAATGTAACAACTGGGGTGGTTGATACAACAGTGTCCAACACTATATTCAGTGATAACCAGCTCGCAGTGTATCAGGTCGATAAGGTGCTTCTTCCTATGGCCCTTTTTGGCTCGACGGCGCCGGCGGCAGCACCGGCGGAGGCTCCTGCGCCGACCAAGCCGGAGAAGAATGTCCGGGCAGGGGCAGCTGATTCTCCATCAGGGTCGTCGGCTGATGCTTCCGGTGCAGTGAGTTTGAAAAGGAAGACAGTTGAAGTTGTTACCTTCGTTGTTGCAGTTATTGCTGTTTCTTGTTTCTGA 888 0.4842 MRASCHLILIATFHLTFYLSNLHAPSSSYIYYNTTSLLPLVTNILVFFLASFLTPMAKLFHFLLLLFIQTISAQVAPAPAGPTNITQVLEKAGQFTTFIKLLKATQTADRLNSQLNNSNQGLTVFAPTDNAFTSLKAGTLNSINSQDQMQLVQFHILPTLYTISQFQTASNPLHTQAGNSDDGEYPLNVTTSGNQVNVTTGVVDTTVSNTIFSDNQLAVYQVDKVLLPMALFGSTAPAAAPAEAPAPTKPEKNVRAGAADSPSGSSADASGAVSLKRKTVEVVTFVVAVIAVSCF* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1828 295 MobiDBLite consensus disorder prediction 239 271 - -
Pvu1g1828 295 Pfam Fasciclin domain 94 228 IPR000782 -
Pvu1g1828 295 SMART fasc_3 123 229 IPR000782 -
Pvu1g1828 295 SUPERFAMILY FAS1 domain 81 228 IPR036378 -
Pvu1g1828 295 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 61 291 IPR045003 -
Pvu1g1828 295 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 11 61 291 - -
Pvu1g1828 295 ProSiteProfiles FAS1/BIgH3 domain profile. 82 226 IPR000782 -
Pvu1g1828 295 Gene3D FAS1 domain 68 229 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1828 Pvu-Chr1 43979745 43981143 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1828 - - pvu:PHAVU_001G176400g 500.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1828 1 43979745 43981143 Pvu1g1828 1 43979745 43981143 ECH