Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1815 ATGGGTTCACTAGAAAGATCAAAAAAGAAAGTTCTTCTATGGAAGAAGGCCATGCTCCATTTTTCCCTATGTTTTGTGATGGGATTTTTCACAGGCTTAGCTCCAACAGGTAAATCTTCTCTCTTTTCCACCAAAGTTGCTGTTTCGAATAGGACTCAGTTTGCTCCACAACCTGTTGAAATGTCACACCTCACAACAAATGTCAATAGAAGTTGGATAGCTCCTCCTCCAGTCACCATGCCCATGAAACCTACAATCCTTGAAACTGAAAAGAAAAAAGCAACACCCAAGTTAAAAGAACAGCCCCAGTTGAAGCCTAGAAGACTCATAATCATTGTGACTCCAACAAGCACAAAACTACCCCACCAAGCAGTGTTTTTGAGAAGATTGGCAACTACTATAAAGCTTGTTCCTCAACCATTGCTGTGGATTGTTGTGGAAGCAAAAACAAATTCCACAGAACTTCCTGAGATACTGAGGAAAACTGGCATCATGTATAGGCATGTTGTTTTCAAGGAAAACTTCACTGAATTAGAAGCTGAACTGAATCACCAGAGAAATCTCGCACTCAAGCACATTGAGCACCACAGACTCAACGGCATTGTACACTTTGCTGGCCTTTCTAATGTCTATGATCTCCAATTCTTCCATCAGCTTAGGGATATTGAGGTGTTTGGAACATGGCCAACTGCATTGTTAGCTGCACATAGGAAGAAAGTGAAAATCGAAGGACCTGTTTGCGATTCATCACAAGTGATTGGTTGGCATCTAAGGAATATGAATAATGAAACTGATACAATCACTCCCCCAATTCATATTTCAAGTTTTGCATTTAATAGTTCCATCCTTTGGGACCCTGAGAGATGGGGTCGCACTTCCTCTGTTCAAGACACTTCTCAGAATTCAATCAAGTTCGTGAAGCAAGTAGTTCTAGAAGATGAGGCTAAGTTAAAGGGAATTCCACCAGAGGACTGCTCCAAAATCTTGCTCTGGCGTTTCAATTTTCGTGCCCAAACCACCTCAAATCACTAA 1032 0.4128 MGSLERSKKKVLLWKKAMLHFSLCFVMGFFTGLAPTGKSSLFSTKVAVSNRTQFAPQPVEMSHLTTNVNRSWIAPPPVTMPMKPTILETEKKKATPKLKEQPQLKPRRLIIIVTPTSTKLPHQAVFLRRLATTIKLVPQPLLWIVVEAKTNSTELPEILRKTGIMYRHVVFKENFTELEAELNHQRNLALKHIEHHRLNGIVHFAGLSNVYDLQFFHQLRDIEVFGTWPTALLAAHRKKVKIEGPVCDSSQVIGWHLRNMNNETDTITPPIHISSFAFNSSILWDPERWGRTSSVQDTSQNSIKFVKQVVLEDEAKLKGIPPEDCSKILLWRFNFRAQTTSNH* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1815 343 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 1 341 IPR005027 GO:0015018|GO:0016020
Pvu1g1815 343 CDD GlcAT-I 108 337 IPR005027 GO:0015018|GO:0016020
Pvu1g1815 343 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 109 343 IPR029044 -
Pvu1g1815 343 Pfam Glycosyltransferase family 43 130 334 IPR005027 GO:0015018|GO:0016020
Pvu1g1815 343 SUPERFAMILY Nucleotide-diphospho-sugar transferases 108 339 IPR029044 -
Pvu1g1815 343 PANTHER BETA-1,4-XYLOSYLTRANSFERASE IRX9-RELATED 1 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1815 Pvu-Chr1 43856280 43858660 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1815 1 339 Glycosyltransferase AT2G37090 61.207 6.45e-151 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1815 K20869 - gmx:100785607 650.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1815 1 43856280 43858660 Pvu1g1815 1 43856280 43858660 ECH
Pvu1g1815 1 43856280 43858660 Pvu7g1690 7 39399948 39402634 PCT