Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1788 ATGAACTATTGTAAAGAAGAACTCTCAAATTGTCCTTCCTATGAAGAACATAGTTTAGATGATTGTAGTAGTAATCTGGAGACATATTCAGAATATGAGAACATGGACCTGGAGAACTTTGTCTATGAAAAGGTTTCAGAGGAAATTGAAGCAAGAAAGGATGCTAGTGGAGTTGTTCCGTTTCATCTTCATGCACCCAAGACTCTTCTGAGTTTAGTTGACGTAATATTCTGCGAGATGTTGATCAGAGTGGTGCAGTATTTCTGCGAACAAACTGGCAGGAACGGTAATGCTGTATCTTACAATGGACTTGAGATTATTCTACAACAGCTACAAAAATTGGCACCTGAACTGCATCGGGAAATTCGGTTGAGTTCTCAGTTGATTAGTGATTTTAGCTATGAGAGTTCTGCAATGACAATTGACGGTGCCTTTAGTACAGCTTGGCTTATGAATTTACAAAAGCCAACAGGTTCTCCGGTTTTCTGTCAAGAGATTGGATCTCGCAGCAGCTCTAATGTTTCCCAATTCATCGCACAACCAACCTCAATTCCTGGATCTGTTTTGTCAAGAGATTGA 579 0.3972 MNYCKEELSNCPSYEEHSLDDCSSNLETYSEYENMDLENFVYEKVSEEIEARKDASGVVPFHLHAPKTLLSLVDVIFCEMLIRVVQYFCEQTGRNGNAVSYNGLEIILQQLQKLAPELHREIRLSSQLISDFSYESSAMTIDGAFSTAWLMNLQKPTGSPVFCQEIGSRSSSNVSQFIAQPTSIPGSVLSRD* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1788 192 PANTHER BNAC08G44850D PROTEIN 3 81 - -
Pvu1g1788 192 PANTHER BNAC08G44850D PROTEIN 120 188 - -
Pvu1g1788 192 PANTHER ANAPHASE-PROMOTING COMPLEX SUBUNIT 5 3 81 IPR037679 GO:0005680
Pvu1g1788 192 PANTHER ANAPHASE-PROMOTING COMPLEX SUBUNIT 5 120 188 IPR037679 GO:0005680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1788 Pvu-Chr1 43594808 43597901 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1788 K03352 - pvu:PHAVU_001G172500g 386.341