Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1782 ATGAATGTGGTGGGCAAAGTTGGAAGCTTGATAACCCAAGGTGTCTATTCAGTTGCTACCCCTTTTCATCCCTTTGGTGGGGCGGTTGATGTCATTGTTGTCCAGCAGCAAGATGGCACGTTCCGCTGCACGCCGTGGTATGTTCGCTTTGGTAAGTTTCAAGGTGTGCTCAAAGGTACTGAAAAAGTTGTTCGGATAAACGTCAATGGGGTTGAATCACACTTCCACATGTATCTTGACAATTCGGGGGAGGCTTATTTTGTAAAAGAGGTGGATGATGATGGTGGTGGTGATAAAGGAATAAAGTCAAATGGGACTGCTGATAACTCTGAGTGTAGTCAAGAAGACGTTGGTGTTGAAATTGATAAAAAAAATAATAGTTATCTGAGCATGGATAATAGGCTTGGTCACAGACTTGACCATAGCATATCTGATTCACGGGTGCCTTATCTTACTGGTGAAGACCATTCCTCGGTTTTGTCACAACTTCAAAGAGCAGAATCTGATGTCGATAGGAGATTTTATGAATTCCCTGATGATCAATCCTCTTTTGAAGGTTCACTTGATGTTTCAGAATATGATTCTACTAGGTATGAGACTCTAGACGTGGAGAATTTTATGGACTCACAGGGCTCCCATCCGGAGGTGGTTTTGGTCAGTGTTGATGGTCATGTATTGACGGCCCCTATCTCAGAATCAGAGCAGAATGAGGACAATGTTCAGTTAAAAAATCCTCAATTTCATCTAGGCCCAGGTGAAGGGACTGACTTCTATGAGGGCAATGGGGAACTTATTTCTGATGAAAATGCTTGGACTGCTGATTATGTTAGTCAGCTGGATGCTTCTAGTAGTTATGACACTAAGGTTGGTGATGATACTTCGGAGCTCCTGTTGGAAGCTCAAAGACAGGAGGAAAATAATTGTTGCACTGAGGAAACCTTAGTGATTAAAAATCAAGAAAATCATGTTTTGCAAACTGATTCAGAAGAGGTTGTATCTTGTATGAAGAGAGAGACAGTCTTTAAAAGTTGTTTGGAATTACACGAGTTTGCTCAGCAGGCTGGAAATGCTGATTTACAAGATGTAGATTCTTCATTGGAGGTTCAAAATTCAGAAGAGGAATCTATTGCAATTTGTTCAATTACTGATGAGAATGAAGACGAAAACATTCAGGCTGATTTACTAGATGTAATAAGTTCTTCACTGGAGGTTCGAAATACAGCAGAGGAATTCATTGCAAATGGTTCAATTACTGATGAAAATAAACAACAAAACATCGAACAATGTAGAAAAATTGACGAGTTATCTCCCCTTAGTGCACCTTCTTCCTTGGATGACCATAGTTCTCCAGAATTAGAAGTAGAACCTCAAGAGGTTGATAAAGATGCATCGGTGAAAGTTGACACTGGTTCTGGAAGTCATTCTGGTACTACGGATATTATTGGATGTAACGATGAACATGTTGGAGAGTCAGTATCAAATGATCAGGTTGGTGATAGTCAACAAACTCCTGCAATTGAAGATGCCAGTAAGAATAGTGAACCAACTGAACCTCAAAGAGAAACTTCCAACGAGGAGAACCAATGTCATTCTGCTTTGAGATTTGAGGCCTCACTTTGTGGTCATGAACTTAAGGTGGGTATGGGTTTAGTTGCTGCTGCTGAGGTTTTTGAAGCACATCGGATATCTGTGGAGGAATTTAGAAGTTCTGCACCATCCATAATTAAGAATGAAAATCTGGTTTTGAAGTTCAGAGAGAGGTATCTGCGGTGGGAAAAGGCTGCTCCTGTTGTCCTTGGAATGACTGTATTTGGTTTAGACTTACCTGTTGATCCCAAAGATACAATTCCAGTGGGACAGGATGGTGCAGTAAAGGCTACAAATGAAGATTCCGGGCCAGCTTCATCTGGACGCAGATGGAGACTTTGGCCAATTGCTTTTAGAAGAGTAAAGACAATTGAGCACACTGATAGTGCATCAAATGAGGATGTATTCGTAGATTCTGAGTCTGATTGGCAAACTTCTATTGTCGAACCTTCTCCAACATCTGCTAGGCATGAGTCTCCTCGCAAGCAATTCGTGAGGACAAATGTTCCGTCTAATGAGATGATAGCGTCCTTAAATCTCAAGGATGGTCAAAATTTGGTAACCTTCAGTTTCTCTTCCAGGGTTCTTGGAACACAGCAGGTTGATGCTCATATTTACTTATGGAAGTGGAATGCAAGAATTGTAATTTCAGATGTAGATGGAACTATTACCAAATCTGACGTTTTGGGGCAGGTCATGCCTTTAGTTGGCAAAGATTGGACACAGTCTGGAGTGGCAAGGCTTTTCTCAGCCATTAAAGAGAATGGATACCAGCTACTGTTTTTGAGTGCCCGTGCTATTGTCCAAGCTTATCTTACCAGGAATTTTTTAGTTAACCTGAAACAGGATGGCAAGACCTTACCCAATGGACCTGTTGTTATTTCTCCTGACGGATTATTTCCCTCTCTTTACCGAGAAGTAATAAGAAGGGCACCTCATGAGTTCAAGATTGCTTGTCTAGAGGATATCAAAAGACTTTTCCCTTCTGATTATAATCCATTTTATGCGGGGTTTGGCAATAGAGACACGGATGAACTTAGTTACAGGAAGATTGGAATCCCAAAGGGCAAGATATTTATCATCAATCCCAAGGGTGAAGTCGCAACAAGTCACCGTATTGATTCAAAATCCTACACATCATTACACACACTCGTCAATGATATGTTCCCTCCCACTTCCTTGGTTGAGCAGGAGGATTTCAACTCATGGAATTATTGGAGAATGCCTTTTCCAGACGTGGATTAG 2832 0.4121 MNVVGKVGSLITQGVYSVATPFHPFGGAVDVIVVQQQDGTFRCTPWYVRFGKFQGVLKGTEKVVRINVNGVESHFHMYLDNSGEAYFVKEVDDDGGGDKGIKSNGTADNSECSQEDVGVEIDKKNNSYLSMDNRLGHRLDHSISDSRVPYLTGEDHSSVLSQLQRAESDVDRRFYEFPDDQSSFEGSLDVSEYDSTRYETLDVENFMDSQGSHPEVVLVSVDGHVLTAPISESEQNEDNVQLKNPQFHLGPGEGTDFYEGNGELISDENAWTADYVSQLDASSSYDTKVGDDTSELLLEAQRQEENNCCTEETLVIKNQENHVLQTDSEEVVSCMKRETVFKSCLELHEFAQQAGNADLQDVDSSLEVQNSEEESIAICSITDENEDENIQADLLDVISSSLEVRNTAEEFIANGSITDENKQQNIEQCRKIDELSPLSAPSSLDDHSSPELEVEPQEVDKDASVKVDTGSGSHSGTTDIIGCNDEHVGESVSNDQVGDSQQTPAIEDASKNSEPTEPQRETSNEENQCHSALRFEASLCGHELKVGMGLVAAAEVFEAHRISVEEFRSSAPSIIKNENLVLKFRERYLRWEKAAPVVLGMTVFGLDLPVDPKDTIPVGQDGAVKATNEDSGPASSGRRWRLWPIAFRRVKTIEHTDSASNEDVFVDSESDWQTSIVEPSPTSARHESPRKQFVRTNVPSNEMIASLNLKDGQNLVTFSFSSRVLGTQQVDAHIYLWKWNARIVISDVDGTITKSDVLGQVMPLVGKDWTQSGVARLFSAIKENGYQLLFLSARAIVQAYLTRNFLVNLKQDGKTLPNGPVVISPDGLFPSLYREVIRRAPHEFKIACLEDIKRLFPSDYNPFYAGFGNRDTDELSYRKIGIPKGKIFIINPKGEVATSHRIDSKSYTSLHTLVNDMFPPTSLVEQEDFNSWNYWRMPFPDVD* 944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1782 943 Pfam LNS2 (Lipin/Ned1/Smp2) 698 919 IPR013209 -
Pvu1g1782 943 Pfam lipin, N-terminal conserved region 1 94 IPR007651 -
Pvu1g1782 943 PANTHER PHOSPHATIDIC ACID PHOSPHOHYDROLASE 396 943 - -
Pvu1g1782 943 PANTHER PHOSPHATIDIC ACID PHOSPHOHYDROLASE 1 391 - -
Pvu1g1782 943 Pfam Lipin/Ned1/Smp2 multi-domain protein middle domain 536 643 IPR031703 -
Pvu1g1782 943 PANTHER LIPIN 396 943 IPR026058 -
Pvu1g1782 943 PANTHER LIPIN 1 391 IPR026058 -
Pvu1g1782 943 MobiDBLite consensus disorder prediction 489 512 - -
Pvu1g1782 943 MobiDBLite consensus disorder prediction 437 527 - -
Pvu1g1782 943 SMART lns2 743 899 IPR031315 -
Pvu1g1782 943 MobiDBLite consensus disorder prediction 448 467 - -
Pvu1g1782 943 SUPERFAMILY HAD-like 735 885 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1782 Pvu-Chr1 43536773 43544195 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1782 K15728 - gmx:100780784 1513.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1782 1 43536773 43544195 Pvu7g1650 7 38821129 38830079 PCT