Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1777 ATGAAAGGCATAGACATCTTCTGTGCATCACAGGCCTCAACAGCCATATGTCTTAGCATGGATCAACCCTCTTCCTCCATTTCCAACACAGCTCAATTTGGTGGCAGAGCCATTGACCGCCACAACCCCATCATCACAGATCCAAGAAGAACACCCTCCAGAGACTTCATTGTCCCTAGTTCTTCTCCTAAGCTTCACAATGACCCCAAACCTTTGCATGATCTCCCGAAGGCTAAGAAAAACTCCACTTCCAAGCCAAGTGGCCAGAAAAAGAAAAATGCAACAAAGGGTCTTGATCAAAAGAAGAAAAGTAGCGCGGGAAAGTTGACTGAACACATCACTAACAATTACTCTTCAAAACCAATTGATAGTATTCTGAGGAGGAGTTGGGCTAGGCCACCTACTGATTTAATCACTCCTCCTGGTTCTTCAAGATATTTGCTCGGTGAAACGCCTTCCTTCGATGGTGGATCATCAGTTTATGATCCTGTTTTGGCTCCAACTAACGTTGATAAGGAGAAAGGTCATGTCCTTCATCATGATCAAACCACCCATTCATCTAAACCCTCTTCTAGCTCCTCTCTTCCAAAATCGGCTTCCTCAGACCAGGTTGTAGTTTTGAGGGTTTCTCTGCACTGCAAAGGTTGTGAAGGGAAGGTGAGGAAACATCTCTCCAGAATGCGAGGAGTTACATCCTTCAACATAGACTTTGCGGCAAAGAAGGTTACAGTGGTTGGTGATGTGACTCCTTTGAGCGTATTGGCAAGCATATCAAAGGTGAAGACTGCACAATTTTGGCCAGAACCTCCTTCAGTAATTGGATCCGGTTATGCAGAAACAAACAAAACAAATTTTATCTAA 861 0.4413 MKGIDIFCASQASTAICLSMDQPSSSISNTAQFGGRAIDRHNPIITDPRRTPSRDFIVPSSSPKLHNDPKPLHDLPKAKKNSTSKPSGQKKKNATKGLDQKKKSSAGKLTEHITNNYSSKPIDSILRRSWARPPTDLITPPGSSRYLLGETPSFDGGSSVYDPVLAPTNVDKEKGHVLHHDQTTHSSKPSSSSSLPKSASSDQVVVLRVSLHCKGCEGKVRKHLSRMRGVTSFNIDFAAKKVTVVGDVTPLSVLASISKVKTAQFWPEPPSVIGSGYAETNKTNFI* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1777 286 Gene3D - 200 263 - -
Pvu1g1777 286 SUPERFAMILY HMA, heavy metal-associated domain 203 261 IPR036163 GO:0046872
Pvu1g1777 286 PANTHER COPPER CHAPERONE 1 282 - -
Pvu1g1777 286 MobiDBLite consensus disorder prediction 92 108 - -
Pvu1g1777 286 MobiDBLite consensus disorder prediction 184 199 - -
Pvu1g1777 286 Pfam Heavy-metal-associated domain 207 258 IPR006121 GO:0046872
Pvu1g1777 286 MobiDBLite consensus disorder prediction 177 199 - -
Pvu1g1777 286 ProSiteProfiles Heavy-metal-associated domain profile. 203 260 IPR006121 GO:0046872
Pvu1g1777 286 PANTHER OS08G0405700 PROTEIN 1 282 IPR044526 -
Pvu1g1777 286 CDD HMA 206 259 IPR006121 GO:0046872
Pvu1g1777 286 MobiDBLite consensus disorder prediction 23 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1777 Pvu-Chr1 43473986 43475913 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1777 - - gmx:100810015 463.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1777 1 43473986 43475913 Pvu7g1640 7 38643380 38645054 PCT