Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1772 ATGAGCACTGACGCCCCCGTCAAAACCCCCTCCACTTCCTTCCTCAACCGCCTACAGACCGGCTTTCTCCATTTCGCCAAGTACCACGGCCTCGGAAACGACTTCGTTTTGATTGACAATAGAGACTCGTCCGAGCCCAGGATCACTGCAGAGAAAGCGGTGCAACTGTGTGATCGGAACTTCGGTGTTGGAGCTGACGGAGTTATCTTTGTATTGCCTGGCATCAATGGCACTGATTATACCATGAGAATTTTCAACTCTGATGGTAGTGAACCTGAGATGTGTGGCAATGGAGTGCGATGCTTTGCCAAATTCGTTTCTCAGCTTGAGAATTTACAAGGAAGCCATAGTTTTACCGTACATACAGGTGCTGGTCTGATTATACCTGAAGTCTTAGAGGATGGAAATGTAAGAGTTGACATGGGGGAACCGGTTCTTAAAGCCTCAGATGTGCCTACTAAATTACCTGCAAACAAGGATAATGCTGTTGTTAAATCGGAGCTGGTCGTGGATGGAGTTATCTGGCATGTGACCTGTGTTAGCATGGGAAATCCACACTGTGTTACTTTCAGTAGAGAAGGAAGCCAGAATTTGCTTGTTGATGAATTGAAGCTAGCAGAAATTGGCCCAAAATTTGAACATCATGAGGTGTTCCCAGCACGAACTAACACAGAGTTTGTGCAAGTATTGTCTAATTCTCACTTGAAAATGCGTGTTTGGGAGCGGGGAGCAGGAGCAACCCTAGCCTGTGGAACGGGAGCTTGTGCTACTGTTGTTGCAGCAGTTCTTGAGGGTCATGCTGGGAGGATATGCACGGTTGATCTACCTGGAGGGCCGCTTCAGATTGAGTGGAAGGAGGAAGATAATCATGTGTATATGACAGGCTCAGCCGATGTAGTTTATTATGGATCTTTGCCTCTTTGA 924 0.4686 MSTDAPVKTPSTSFLNRLQTGFLHFAKYHGLGNDFVLIDNRDSSEPRITAEKAVQLCDRNFGVGADGVIFVLPGINGTDYTMRIFNSDGSEPEMCGNGVRCFAKFVSQLENLQGSHSFTVHTGAGLIIPEVLEDGNVRVDMGEPVLKASDVPTKLPANKDNAVVKSELVVDGVIWHVTCVSMGNPHCVTFSREGSQNLLVDELKLAEIGPKFEHHEVFPARTNTEFVQVLSNSHLKMRVWERGAGATLACGTGACATVVAAVLEGHAGRICTVDLPGGPLQIEWKEEDNHVYMTGSADVVYYGSLPL* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1772 307 Pfam Diaminopimelate epimerase 25 146 IPR001653 GO:0008837|GO:0009089
Pvu1g1772 307 Pfam Diaminopimelate epimerase 179 299 IPR001653 GO:0008837|GO:0009089
Pvu1g1772 307 Gene3D Diaminopimelate Epimerase; Chain A, domain 1 1 153 - -
Pvu1g1772 307 SUPERFAMILY Diaminopimelate epimerase-like 166 305 - -
Pvu1g1772 307 PANTHER DIAMINOPIMELATE EPIMERASE, CHLOROPLASTIC 8 306 - -
Pvu1g1772 307 TIGRFAM DapF: diaminopimelate epimerase 24 305 IPR001653 GO:0008837|GO:0009089
Pvu1g1772 307 PANTHER DIAMINOPIMELATE EPIMERASE, CHLOROPLASTIC 8 306 IPR001653 GO:0008837|GO:0009089
Pvu1g1772 307 ProSitePatterns Diaminopimelate epimerase signature. 86 100 IPR018510 GO:0005737|GO:0008837|GO:0009089
Pvu1g1772 307 Gene3D Diaminopimelate Epimerase; Chain A, domain 1 157 291 - -
Pvu1g1772 307 Hamap Diaminopimelate epimerase [dapF]. 23 307 IPR001653 GO:0008837|GO:0009089
Pvu1g1772 307 SUPERFAMILY Diaminopimelate epimerase-like 23 152 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1772 K01778 - gmx:100784731 575.089