Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1768 ATGAGGACAGAGTGGAAGAAGTTATCCAAGTCTTCGTGGCCCAGATTAGCCATGAGGAAGTGGCTCAATACGAAGAACGGTGCTGAGAAGTTTGAGTCAGACTATGATGCAACAGCAATTGCGAAGGAAAGAAGAAAGAGTTGCTCGGATGAAGATGGTTACGTGGGCGTAGCGGATGATTATTCAGGTTTGGTGGTTGGGAAGCAATCACGTGGCACTGGCACTGGCACTGGAGCTATGAACCTTAGGATGTTCGTGGGAACGTGGAATGTGGGAGGAAAATCACCCAAGGAAGACTTGAGTTTCAGGAATTGGCTCACATCTCCTTCCCAACCTCATATCTATGTTATTGGGTTCCAAGAAATCGTACCGCTAAATGCGGGGAACGTGCTTGGGCCGGAGGACAGTGGTCCAGCAGCTAAGTGGGTGGGCCTTATCCATGAAGCCTTGAACAACAACAACTATGACGACGACGAGGACAAGGGAAATCTCAAGTGTAGGAAAAGTTTCTCTGATTTTGTCTCTTTAGAGGGTGAGTTGGATGACGAAGAAAAGTCTCCTCAGAGTGGAAGAAGCTATTGCTTAGCAGCAAGCAAGCAAATGGTTGGTATCTTCTTGTGCGTGTGGGTACGAAGGGATCTTTGCAACCATGTTTCCAATTTGAAAGTGTCCTGTGTAGGCAGAGGCATAATGGGTTATCTTGGAAATAAGGGTTCAACATCAATTAGCATGACATTGTACAGCACCACGTTCTGCTTCGTTTGCACCCACCTGGCTTCTGGGGAGAAATTTGGTGACGAATTGCGAAGGAACTTGGACGTCTCGGAAATCTTGAAGAAAACAAAATTTTCTCGCTCCTTAAAATCTCTTTCTCATTCTCTCCATCCTCAAAGTATTCTGGAACACGATAATATTATTTGGCTTGGCGACTTGAATTATCGACTAGTTGCTGGCTATGATGACACACATGAACTACTAAAGAAGAATAATTGGCAGGCATTACTAGAGAAGGATCAGCTAAGGATAGAGCAGAGAGCTGGTCGAGTATTCAAAGGTTGGAATGAAGGGAACATATACTTTGCTCCTACTTACAAATACTTGACCAATTCTGACCACTATGTCGCTCAATCCTCCAAATCCAAGGAAAAACAACGAACTCCTGCTTGGTGCGATCGAATTCTGTGGAAAGGAGAAAGGCTGAATCAGATGTGGTATGTTCGGGGAGAGTCAAAATTCTCAGACCACAGGCCAGTTTATTCACTATTCTCTGTTGAAGTGGACTTGAAACAGAGAAGCAAGAATCTAGTTCCCAGGTCCTGTACATTAAAACCCTTGACAAGTACTGCTTTGTCATCAACTTGTTGTGCTGCTAAAGTCCAAGCAGAAGAGCAACTCTTGCTGCTAACAAGAGCTCAAAGTTGCATCCAGACAGTTCCCAGGTTTTGA 1446 0.4474 MRTEWKKLSKSSWPRLAMRKWLNTKNGAEKFESDYDATAIAKERRKSCSDEDGYVGVADDYSGLVVGKQSRGTGTGTGAMNLRMFVGTWNVGGKSPKEDLSFRNWLTSPSQPHIYVIGFQEIVPLNAGNVLGPEDSGPAAKWVGLIHEALNNNNYDDDEDKGNLKCRKSFSDFVSLEGELDDEEKSPQSGRSYCLAASKQMVGIFLCVWVRRDLCNHVSNLKVSCVGRGIMGYLGNKGSTSISMTLYSTTFCFVCTHLASGEKFGDELRRNLDVSEILKKTKFSRSLKSLSHSLHPQSILEHDNIIWLGDLNYRLVAGYDDTHELLKKNNWQALLEKDQLRIEQRAGRVFKGWNEGNIYFAPTYKYLTNSDHYVAQSSKSKEKQRTPAWCDRILWKGERLNQMWYVRGESKFSDHRPVYSLFSVEVDLKQRSKNLVPRSCTLKPLTSTALSSTCCAAKVQAEEQLLLLTRAQSCIQTVPRF* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1768 481 SMART i5p_5 80 430 IPR000300 GO:0016791|GO:0046856
Pvu1g1768 481 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 9 470 IPR045849 GO:0004445|GO:0046855
Pvu1g1768 481 Gene3D Endonuclease/exonuclease/phosphatase 71 444 IPR036691 -
Pvu1g1768 481 Pfam Endonuclease/Exonuclease/phosphatase family 87 415 IPR005135 GO:0003824
Pvu1g1768 481 SUPERFAMILY DNase I-like 78 427 IPR036691 -
Pvu1g1768 481 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 8 9 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1768 Pvu-Chr1 43350712 43353947 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1768 81 426 Acyl Lipid Metabolism Gene Families AT1G65580 30.435 2.15e-40 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1768 - - vun:114176714 806.594
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1768 1 43350712 43353947 Pvu7g1632 7 38513629 38518349 PCT