Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1749 ATGGATCACGGGAAGGGTATTGCTTCAGAGTCATCTGCAGCTGTCCGTGAACACAAGAAATGGACTACCGACATGGATTTTCGACTGTTGAATGCCATGATCGATGAGACATCTATGGGTAACCGCATTGATGGTAGTTGGACGACGCAGGGTTACACAAACATCGTTAAATCCTTACATCAGAGTGGATTGGTAGGGATTACAAAAAATAATGTGAAGAACAGGCAGAAAAGCCTTAAGGACAAATGGCGTGAGATCCATGATCTATTTAGTGGACTGAGTGGTTTCGCTTGGAATCCAACCACGAAAATTTTTGAGGCCGAGGATGAAGTGTGGGATATGTTGATAAAGGCAAAGCCCTCAGCCGCAAAGTGGCGTGTTAATCCCATCAGGCACTACAAGTTGATGAAAGACTTATGGGGGTTTGATCGTGCTACCGGCCAAGGTGGGAGAACAACATTGCAGTCATCAAGTCGAACTCAGTCTCATCATTTTAATGTAGATCTTAATGATCACAATATGGAGGACATCCTAGAGGGGCCAGGATTGAATGCTACTCAATGTGAAACTCCTCGCTCAGTTGATCCTAATGTTGATTCATACAGCCCTGGCCCTAATATGACACCCCCATTGGTGCCATCCCAACCATCCCAGCCATCAGGTGGTACTTCTTCTTCAAGAGGCTCAAAAAGAAAAGCCCCCATGGTGGACGTCATTGATCTGCAACTGGAAAGACTTAACACAAGGTTTGAAGGATTAACTGATATCCTTGGAAGGGATAGTGATCAGTCAGATAGGTTATGTCATATTGTTGAGCGACAAGCCATTTCATCTGAGATTGTCGCTTTGTCATCACAGCGAGTGGCTAATGCTACGGAAGAAAATTTGCAATATAACAGACGCCATGTTGTTGCAGAAGAAGAACAAAACTCCATATTTCGTGAACACACACGCACACTCTGTCGTACATCGACTTTCCAGTACTCTGAATCTGATATCTGGGAAATGTTAGTGGAGATGAACATACAGGATGAAGATTTGTTGGATAACTGTTACGACTTCTTGTGTGGTCATCCTAATGTGGTAAATCAACTCTTTGGCCTGCCTCTCGAGCGAAGAATGAGAAAGCTAGTCAAGATAATGACTACAAATCCCTAA 1158 0.4378 MDHGKGIASESSAAVREHKKWTTDMDFRLLNAMIDETSMGNRIDGSWTTQGYTNIVKSLHQSGLVGITKNNVKNRQKSLKDKWREIHDLFSGLSGFAWNPTTKIFEAEDEVWDMLIKAKPSAAKWRVNPIRHYKLMKDLWGFDRATGQGGRTTLQSSSRTQSHHFNVDLNDHNMEDILEGPGLNATQCETPRSVDPNVDSYSPGPNMTPPLVPSQPSQPSGGTSSSRGSKRKAPMVDVIDLQLERLNTRFEGLTDILGRDSDQSDRLCHIVERQAISSEIVALSSQRVANATEENLQYNRRHVVAEEEQNSIFREHTRTLCRTSTFQYSESDIWEMLVEMNIQDEDLLDNCYDFLCGHPNVVNQLFGLPLERRMRKLVKIMTTNP* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1749 385 Pfam Myb/SANT-like DNA-binding domain 20 113 IPR024752 -
Pvu1g1749 385 MobiDBLite consensus disorder prediction 186 204 - -
Pvu1g1749 385 MobiDBLite consensus disorder prediction 177 233 - -
Pvu1g1749 385 Coils Coil 288 308 - -
Pvu1g1749 385 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 9 174 - -
Pvu1g1749 385 PANTHER EXPRESSED PROTEIN 9 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1749 Pvu-Chr1 43132346 43133590 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1749 - - pvu:PHAVU_001G168600g 752.281