Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1746 ATGGGGGAGACTCCGTCTCTGATTAGTCTCTGCATGGACGCTCTGACGCAACAACTTCTCCGTCCATTCGACGATCTTCTTCTTCCTTCTATCTACCTCCTTCCTTCTCACTTGCTCAACACCTTAATCACGCGTTTGCCCCCTTTCGCACTCCGCATATTCCACCACCACCTGCCCTTCGACGAGGAAGGCTTTTCTCGCGATCACTCAACCAACAAGAGGAAACGCGCGGGGGATTGGAATCTGAATTCAGCTTGGCAGATATTATTTCGCCTACGCTGGCCTCAGCGTGTTCAGCTGATTCAGCCAACGGATTGGCAGCAACTCTACTGGGAAATTCATTTGCAAGATTGCTTAGATGAAGCGGCGGAGGTAGCACTAATCCCATCGTTTAGTGGGTCTATTGGTGACATACAGATTTCAGACAGTACACTAAAACATATTGGTTTTGTGGGGGATACAAGCCATTCAACATGTGACCATTCAAAATTGTCTTACCATTGCCTACAATTTGGTAGCCATGCGAGTTGTTTGAGGCTTCAAAATGTTCTATGTACTGCAGAAGCTAGTGTTTTGTTGAGAGAATGTAAGCTGCAAAGTCTGGTACTAAGATGTATCAGATCCAAGGAACAAATTGATGGATTATGCAAACTTCTTGCGCAACATTCAAGAACGTTAACATCTCTGGAATTTGTTCACTGCACATTCTCCGCAGACTTTATTAATGCAATATTTGCTTCTTTAGTCATAGAAGGTGTACAAAAACATGGGATCCAACATTTGTCAATCATTTCGTCATGTTTTCTCGAACCATGCACAGTTTCTCTACCTAGTGGACTTGTGTCATTTTTGTCTTATGGAAGGTCCTTGTGCTCATTAAAATTATCTGACAACCACCATGGACGAACTTTTGCCAAAGATCTTTTAGTGACTCTTCTCGATCTTTCCTCTGGCCTATCTGTCCTTGACCTTTCTGATAATAAAATAGCTGGATGGCTTTCTGACTTTAACAGGAGATTCTTGAGTGATTCACATCTGTGCTTTGGAAGTGGAAAGTTGTTGAAAATGTTGCGAGTACTCAATCTAAGGGAAAACAATTTAGGAAAAGATGATGCAGAAAATCTTAGGTATGCTCTTGAACATTTGCCTAACTTGGAGGAGCTGGATATAAGTGACAATTCAATTGAAGATGAAGGAATCAGGAATTTAATTCCCTATTTTGTTGGAGCATCTGAAACATTTTCTCCCATAAATTGTTTGAAGTTAGAAAACTGTGATCTGTCCTGCGTTGGAGTGAATCATCTCCTACATGTCCTTTCTTCTTTCAAAGGGCCATTGAAGTCTCTTTCTATTGCTGACAATTACCTTGGCAGTCAAGTAACCGAAGCATTGGGAAATTTTTTTAGTACCCCAATCGAAGTACTTGACATTGCAGGGATTGGCTTGGGTTCTTATGGTTTTCAAGAGCTTAAAAATCTAATAAAAGAAGAGCTTAAACTGGTGAAAATTAATATAAGCAAAAATCGTGGTGGGATTGAAACTGCCAAATTTTTGTCCAAGCTTTTGTCACAGGCTCCACAACTAGTTGAAGTGAATGCAGCCAGTAATCTTATGCCAATAGAATCACTGGCCATCGTCTGCTCTGCATTAAAGTTTGCAAAAGGTAATGTTCAGCACGTGGACTTGACAGGACATATATGGGACTGTAAGTCAGAGCACGTTTCTCTATGCACTGAATTTGTACATAATGAATTACCTATATTGGTTCTTCCATCATCATCAATCTCTGCTGCACTTCACGACCATGATCCTTAG 1815 0.411 MGETPSLISLCMDALTQQLLRPFDDLLLPSIYLLPSHLLNTLITRLPPFALRIFHHHLPFDEEGFSRDHSTNKRKRAGDWNLNSAWQILFRLRWPQRVQLIQPTDWQQLYWEIHLQDCLDEAAEVALIPSFSGSIGDIQISDSTLKHIGFVGDTSHSTCDHSKLSYHCLQFGSHASCLRLQNVLCTAEASVLLRECKLQSLVLRCIRSKEQIDGLCKLLAQHSRTLTSLEFVHCTFSADFINAIFASLVIEGVQKHGIQHLSIISSCFLEPCTVSLPSGLVSFLSYGRSLCSLKLSDNHHGRTFAKDLLVTLLDLSSGLSVLDLSDNKIAGWLSDFNRRFLSDSHLCFGSGKLLKMLRVLNLRENNLGKDDAENLRYALEHLPNLEELDISDNSIEDEGIRNLIPYFVGASETFSPINCLKLENCDLSCVGVNHLLHVLSSFKGPLKSLSIADNYLGSQVTEALGNFFSTPIEVLDIAGIGLGSYGFQELKNLIKEELKLVKINISKNRGGIETAKFLSKLLSQAPQLVEVNAASNLMPIESLAIVCSALKFAKGNVQHVDLTGHIWDCKSEHVSLCTEFVHNELPILVLPSSSISAALHDHDP* 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1746 604 PANTHER RNI-LIKE SUPERFAMILY PROTEIN 1 604 - -
Pvu1g1746 604 SMART LRR_RI_2 414 441 - -
Pvu1g1746 604 SMART LRR_RI_2 354 381 - -
Pvu1g1746 604 SMART LRR_RI_2 382 409 - -
Pvu1g1746 604 SMART LRR_RI_2 497 524 - -
Pvu1g1746 604 Gene3D Ribonuclease Inhibitor 158 585 IPR032675 -
Pvu1g1746 604 ProSiteProfiles Leucine-rich repeat profile. 384 404 IPR001611 GO:0005515
Pvu1g1746 604 SUPERFAMILY RNI-like 175 571 - -
Pvu1g1746 604 Pfam Leucine Rich repeat 381 402 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1746 Pvu-Chr1 43049877 43059748 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1746 - - gmx:100817679 991.875
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1746 1 43049877 43059748 Pvu1g1746 1 43049877 43059748 ECH