Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1745 ATGACCAATGATGTTAACCTAGGATTTCACTGCTATATAATTGCACCATTTGGAAATAACAGTGCTAATTATAACATGATTAAGCTCATGTGTAGTACTGTGAGAATAATTTTGGTGGTGGCCATGGCAGTGGTTGTGGTTGCTCCAAAGAGAATAGAAGCATCTCGTGCTTTCTATGTGTTTGGTGACTCACTGGTTGACAGCGGCAACAACAACTACTTGGCAACACCAGCACGTGCTGACTCTCCCCCTTATGGCATCGACTATCCCACTCATCTCCCCACTGGACGCTTCTCCAATGGTTTCAATATCCCTGACCTCATCAGCAAGGGAATTGGATCTGAACCCACATTGCCTTACCTGAGCCCAGAATTATATGGAGAAAGGCTTTTGGTTGGGGCAAACTTTGCTTCTGCTGGGATAGGAATCCTCAATGACACAGGCATCCAATTTGTTGACATCATCAGAATGTTCGAGCAGTTTGCATTTTTTGAGCAGTACCAGGTTCGGTTAAGTGCAGTTCTAGGGGTTCCACGGGCGAAGAACGTTGTGAATGAAGGTCTAGTGCTGATCACACTAGGTGGCAACGACTTTGTCAACAACTATTTCTTGGCTCCTATCACTCCAAGGTCTCAACAATTCACTGTCCCTGACTTCTCTCGCTACCTTGTCTCTCAGTACAAAAAAATTCTTATGAGGCTGTATGAGTTAGGGGCTAGACGGGTGCTGGTGACAGGAACTGGTCCATTAGGGTGTCTTCCTTCTCAACTTGCTACGAAGAGCACAGACGGGGAATGTGTTCCTGAGTTGCAAGAAGCCATGAAGATTTTCAACCCTCTCCTCGATAACATGATCAAAGATCTCAACTCCCAACTTGGCAATCAAATTTTTATTGCTGTCAATGCCTTCCTAATCAACATGAACTACATCACCAACCCTCAAAAATATGGTTTTGTTACGGCGAAGGTAGCATGTTGTGGACAAGGCCCGTACAATGGGCTGGGCCTGTGTACCCCTCAGTCGAGCCTGTGCCCGGACCGAGATGCTTATGCATTTTGGGATGGTTTTCATCCAAGCCAACGTGCAGTTGAGTTCATTGTGGATGCCATCTTTAATGGAACAAGTGAGCTTATGAGCCCTATGAATCTCACCACCATCATGGCCCTCGACTCAAACATCTAA 1182 0.4577 MTNDVNLGFHCYIIAPFGNNSANYNMIKLMCSTVRIILVVAMAVVVVAPKRIEASRAFYVFGDSLVDSGNNNYLATPARADSPPYGIDYPTHLPTGRFSNGFNIPDLISKGIGSEPTLPYLSPELYGERLLVGANFASAGIGILNDTGIQFVDIIRMFEQFAFFEQYQVRLSAVLGVPRAKNVVNEGLVLITLGGNDFVNNYFLAPITPRSQQFTVPDFSRYLVSQYKKILMRLYELGARRVLVTGTGPLGCLPSQLATKSTDGECVPELQEAMKIFNPLLDNMIKDLNSQLGNQIFIAVNAFLINMNYITNPQKYGFVTAKVACCGQGPYNGLGLCTPQSSLCPDRDAYAFWDGFHPSQRAVEFIVDAIFNGTSELMSPMNLTTIMALDSNI* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1745 393 Gene3D SGNH hydrolase 52 377 IPR036514 -
Pvu1g1745 393 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 32 390 - -
Pvu1g1745 393 Pfam GDSL-like Lipase/Acylhydrolase 59 369 IPR001087 GO:0016788
Pvu1g1745 393 CDD SGNH_plant_lipase_like 57 373 IPR035669 -
Pvu1g1745 393 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 32 390 - -
Pvu1g1745 393 SUPERFAMILY SGNH hydrolase 58 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1745 Pvu-Chr1 43041149 43042987 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1745 57 387 Acyl Lipid Metabolism Gene Families AT4G10950 32.432 7.52e-55 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1745 - - aprc:113860789 575.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1745 1 43041149 43042987 Pvu7g1604 7 37996563 38000426 PCT