Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1741 ATGTCCCGTGACTGCGAAAACACCGTTGTTGTGGGGTGTGGAGCGGTGTCGGTGGATTTCTTGGCTACTGTTGCAGCTTATCCAAAACCAGATGACAAAATCAGAAGCACTTCCTTCAAGGTTCAAGGAGGTGGCAATGCAGGCAATGCCTTAACCTGTGCCTCTCGCTTAGGACTCAAACCAAGAATAATTTCCAAGGTTGCAGATGATACTCAAGGAAGGGAAGTATTACGTGAGCTAGAGGCTGATGGGGTAGATACATCCTTCATGGCTGTTTCTCAGGAGGGCACTTCACCATTTACGTATGTCATTGTGGACAGTCAAACTAAGTCCCGTACTTGTATACATACCCCAGGATATCCACCGATGAAGCCAGTTGATCTTTCCGAGTCAAGTTTATTAACTGCATTGAATGGAGCAAAAATTGTTTATTTTGATGGGAGACTGCATGAAACGGCTCTAGTTGTTGCACATGAGGCAGTTAAGAAGAATATACCTATCTTAATGGATGCAGAAAGGCTGAGAGAAGGGTTGGATGATCTCCTGAAATTAGCAGATTATGTTGTGTGCGCTGCACAGTTTCCACAGGCATGGACAGAGGCATCAACAGTTCCTAAAGCATTAGTTTGTATGCTTTTAAGGTTGTCGAACATCAAATTTGTGATTGTAACTTTGGGAAAAGATGGTTGCATAATGCTGGAGAGAAGTTTTAATGAGGGTCCTTCCACTGAAGAAATGGATGTTGACCAATTACTGGAATCCCTGGAGATGAGAAAGAACAGAAGGACACACATCCCAACCTGCATATCATCATCAGTGACAAAATTGCATGCAGAAGGTATAGGAACAGTTTTTGGGAAGTTATACGTTGGAACAGCTGAGAATGTACCTCCATCAGAGCTTATTGATACAACTGGTGCTGGAGATGCATTTATTGGATCTATTCTCTATGCTATCTGTGCCAACTTCACGCCAGAGAAAATGCTGTGCTTTGCTGCTACTGTGGCAGCTTCCAAGTGCCGAGCTATAGGAGCAAGAACTGGTCTCCCTTACCACACAGATCCATGTCTGGCATCCTTCATGAACTAG 1089 0.4399 MSRDCENTVVVGCGAVSVDFLATVAAYPKPDDKIRSTSFKVQGGGNAGNALTCASRLGLKPRIISKVADDTQGREVLRELEADGVDTSFMAVSQEGTSPFTYVIVDSQTKSRTCIHTPGYPPMKPVDLSESSLLTALNGAKIVYFDGRLHETALVVAHEAVKKNIPILMDAERLREGLDDLLKLADYVVCAAQFPQAWTEASTVPKALVCMLLRLSNIKFVIVTLGKDGCIMLERSFNEGPSTEEMDVDQLLESLEMRKNRRTHIPTCISSSVTKLHAEGIGTVFGKLYVGTAENVPPSELIDTTGAGDAFIGSILYAICANFTPEKMLCFAATVAASKCRAIGARTGLPYHTDPCLASFMN* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1741 362 SUPERFAMILY Ribokinase-like 10 352 IPR029056 -
Pvu1g1741 362 Gene3D - 9 347 IPR029056 -
Pvu1g1741 362 CDD ribokinase_group_B 9 351 - -
Pvu1g1741 362 PRINTS Ribokinase signature 12 33 IPR002139 GO:0016301
Pvu1g1741 362 PRINTS Ribokinase signature 39 58 IPR002139 GO:0016301
Pvu1g1741 362 PRINTS Ribokinase signature 221 232 IPR002139 GO:0016301
Pvu1g1741 362 PANTHER PHOSPHOTRANSFERASE SYSTEM TRANSPORT PROTEIN 6 361 - -
Pvu1g1741 362 PANTHER PFKB-LIKE CARBOHYDRATE KINASE FAMILY PROTEIN 6 361 - -
Pvu1g1741 362 Pfam pfkB family carbohydrate kinase 13 237 IPR011611 -
Pvu1g1741 362 Pfam pfkB family carbohydrate kinase 292 350 IPR011611 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1741 Pvu-Chr1 42920938 42926445 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1741 - - ccaj:109795876 648.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1741 1 42920938 42926445 Pvu1g1741 1 42920938 42926445 ECH
Pvu1g1741 1 42920938 42926445 Pvu7g1592 7 37811164 37816901 PCT