Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1734 ATGTACCAACTTCTGACACTTTCTTCACATTCATCTCAGTTCTCATCCATGGCTGCAGAATCCAACTCAAACCTCAGAATCACCATTGAAAGAAACCCTCCCCAGCCACGCCTAGCTGAGTTGAACATCAAGTGCTGGCCCAAGTGGGGTTGTTCTCCAGGGAAGTACCAGTTGAAATTTGATGCAGAAGAGACGTGCTACTTGGTGAAAGGGAAGGTGAAGGCATACCTAAAAGGGTCATCAGAGTTTGTGGAGTTTGGAGCTGGGGACCTTGTGACAATTCCAAAAGGACTGAGTTGCACTTGGGATGTGTCTGTTGCAGTGGATAAGTACTACAAATTTGAATCAAATTCTTCTTCTACATCATCATCATCATCTTGTTAA 384 0.4427 MYQLLTLSSHSSQFSSMAAESNSNLRITIERNPPQPRLAELNIKCWPKWGCSPGKYQLKFDAEETCYLVKGKVKAYLKGSSEFVEFGAGDLVTIPKGLSCTWDVSVAVDKYYKFESNSSSTSSSSSC* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1734 127 PANTHER OS04G0445200 PROTEIN 19 121 - -
Pvu1g1734 127 SUPERFAMILY RmlC-like cupins 42 112 IPR011051 -
Pvu1g1734 127 Gene3D Jelly Rolls 15 114 IPR014710 -
Pvu1g1734 127 PANTHER RMLC-LIKE JELLY ROLL PROTEIN-RELATED 19 121 - -
Pvu1g1734 127 CDD cupin_TM1112-like 46 114 - -
Pvu1g1734 127 Pfam EutQ-like cupin domain 39 112 IPR008579 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1734 Pvu-Chr1 42864569 42865549 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1734 - - pvu:PHAVU_001G167300g 223.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1734 1 42864569 42865549 Pvu1g1734 1 42864569 42865549 ECH
Pvu1g1734 1 42864569 42865549 Pvu7g1588 7 37777126 37778063 PCT