Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1733 ATGGCGGATTTAGAAAATTTGCTCTTGGAGGCAGCAGGTAGAACCCGACACTCTCGTCCAACATCAAGAAGAGGACATGGTGATGGTGAGAGTGTCTTCAGTTCGGATGATGAACATGAGTATCCAGGTCCAAATCACCCTGGCTCACGTGTTATCCTAAAGAAGAGATTTGATCCAAAGGAAAGAGATGATGGCAAGGGAAGTCAGGAAGAAGGGGATGACGATGTTGGTGGCCGATCTGATCACAAGGGTGATAGCAGCGATGACTATGATTTTGGTGATGATCTTTATAAGAATGAAGATGACAGGCGTAAGCTTTCTGAGATGACTGAACTTCAGAGAGAGATGATATTATCTGATAGGGCTACCAAGAAGTATGATAAAGATTTATTGGGGAAGATATCGTCAAAGCGGGAGAAGGGAAAGACAACTATACCTGGGACACATAGTTCACCTCTTCCACCATCTCGTGTGCGGTCATCAGTCAGATCAGTTGACAGGTCAGCTGCCAAGGATGGTGCTTTAAATGAATTGCGTGCGAAAAGATTAAAGCAGCAAGATTCAGAAGCAAACCGCAAAGTAAGTGAGGCATCTAAAAGTTCAGGGCCTGAACATGTTTCACCAAAGCACAAACCTTTCTCTTCAACAAGTCTCACAAGCTCAAGTGATAGTGAAAGTGAAAACAGGTCCCTGAGTTATGATGCAGGGTTGAGTGATGATGAAATGATCATTGACAGTGATGATGACCGGATAATTTTAGGATCTGAAGGACTTTTATTTGAGGATATAAAAGAAATCACCGTTTGCAGATCGAAACTAACAAAATGGTTTATGGAGCCCTTTTTTGAGGAATTAATTGCTGGTTGCTTTGTAAGAGTTGGTATTGGTAGATCAAAGGCAGGACCTATCTACAGGCTCTGCATGGTAAAAAATGTTGATGCCACAGACTGTGATCGGGAGTATAAATTAGAAAATAAAATCACACACAAGTACTTAAATCTTGTCTGGGGAAATGAAACTTCTGCTGCGAGGTGGCAAATGACTATGGTTAGCGACTCTCTTCCCCTTGAGGAGGAGTTCATCCAGTGGAATAAGGAAGTAGAGCGAAGAGGCGGTCGGAGGCCAACAAAGCAAGAAGTGGAAGAAAAAAAACAAGCTATACAAAATATCAACTTGTTTGTTTACTCAGCTGCTACGGTGAAGCAGATGTTACAAGAGAAAAAAACTGCCAAAATAAGACCACTAAATATTGCAGCTGAGAAGGATCGGTTAAGAACGCAATTAGAAATAGCACACAGTAAGCAAAATAATACTGAAGTGAACAAGATCATGACAAGGTTGCAAGAATTGGAGGAATCTCAGCACTCTAAGGAGAAGGATGTCAGAGCTTTGAAGCTTTCTGAGATGAATAAAAAGAACAGGTTTGAGAACTTCAAAAATGCTTCTGAATTGAAGCCAAGAAATACAGATTTGAAAGCAGGGGAGGCGGGTTATGATCCATTTTCAAGGAGATGGACTCGATCAAGAAATTACTATGCCGCAAAACCAGCTGAAGAGGTTGCAGCTGAAAATAATAGTTCCATTGATATGGTGGCTGATGAAGGCAGCTATCAGACGACAACAGCTGTGACAGGGGTGGCTGGCATGGCGGCTACGGCTGCAGCATTGAAAGCTGCTGCCGGTGCTGGGAAGTTAGTTGATACAAGTGCTCCGGTGGATCAAGGGACAGTGTCAAATGTGCTGCACGATTTTGAGCTGCCAATATCATTATCCATACTCCAAAACTTTGGTGAAGGCCAAGGAATTCAGGCAGGGTTTATGGCAAGAAAACAGAGAATAGAAGCAACTGTTGGATTTCAAGTCCCGGAGGAAAAAGGTAAGAGGGATGCGCGGACATTAACAGTTAGTGATTACAAGAGAAGAATAGGGCTTTTCTGA 1938 0.4267 MADLENLLLEAAGRTRHSRPTSRRGHGDGESVFSSDDEHEYPGPNHPGSRVILKKRFDPKERDDGKGSQEEGDDDVGGRSDHKGDSSDDYDFGDDLYKNEDDRRKLSEMTELQREMILSDRATKKYDKDLLGKISSKREKGKTTIPGTHSSPLPPSRVRSSVRSVDRSAAKDGALNELRAKRLKQQDSEANRKVSEASKSSGPEHVSPKHKPFSSTSLTSSSDSESENRSLSYDAGLSDDEMIIDSDDDRIILGSEGLLFEDIKEITVCRSKLTKWFMEPFFEELIAGCFVRVGIGRSKAGPIYRLCMVKNVDATDCDREYKLENKITHKYLNLVWGNETSAARWQMTMVSDSLPLEEEFIQWNKEVERRGGRRPTKQEVEEKKQAIQNINLFVYSAATVKQMLQEKKTAKIRPLNIAAEKDRLRTQLEIAHSKQNNTEVNKIMTRLQELEESQHSKEKDVRALKLSEMNKKNRFENFKNASELKPRNTDLKAGEAGYDPFSRRWTRSRNYYAAKPAEEVAAENNSSIDMVADEGSYQTTTAVTGVAGMAATAAALKAAAGAGKLVDTSAPVDQGTVSNVLHDFELPISLSILQNFGEGQGIQAGFMARKQRIEATVGFQVPEEKGKRDARTLTVSDYKRRIGLF* 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1733 645 PANTHER PLUS-3 DOMAIN PROTEIN 1 644 - -
Pvu1g1733 645 Coils Coil 447 467 - -
Pvu1g1733 645 Gene3D - 259 389 IPR036128 GO:0003677
Pvu1g1733 645 SMART rtf1 257 369 IPR004343 GO:0003677
Pvu1g1733 645 MobiDBLite consensus disorder prediction 51 101 - -
Pvu1g1733 645 Pfam Plus-3 domain 262 367 IPR004343 GO:0003677
Pvu1g1733 645 MobiDBLite consensus disorder prediction 22 44 - -
Pvu1g1733 645 MobiDBLite consensus disorder prediction 1 101 - -
Pvu1g1733 645 MobiDBLite consensus disorder prediction 118 232 - -
Pvu1g1733 645 MobiDBLite consensus disorder prediction 118 144 - -
Pvu1g1733 645 MobiDBLite consensus disorder prediction 145 163 - -
Pvu1g1733 645 PANTHER UNCHARACTERIZED 1 644 - -
Pvu1g1733 645 ProSiteProfiles Plus3 domain profile. 257 392 IPR004343 GO:0003677
Pvu1g1733 645 MobiDBLite consensus disorder prediction 164 194 - -
Pvu1g1733 645 SUPERFAMILY Plus3-like 260 389 IPR036128 GO:0003677
Pvu1g1733 645 MobiDBLite consensus disorder prediction 210 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1733 Pvu-Chr1 42856008 42859005 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1733 K15178 - gmx:100817324 909.442