Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1731 ATGAAGATGGACTCAAAAGGAGAGGCTGAACCTCAGGAGGAGAGGCCTTCATCACCAATGCGGGTCCTGCAGCATTTTTCGGGGGGCGCATTCAGAGTTGCTGGGGAAGCATTTCAGAATATGTATTCTAGTGGTGGGTCAAGCATGCCACAAACGGGGCTTGGTGGGCATAGACGTTGTCAAAGTGAGCTTGTTAGTAGAGGAGTTCAGCGTACTAATAGCTTACAGAAATTAAGATCTCACGTGCACAGGGCATGGCGCTGGGGTGGCAAATCCCGTGAAGAAGATTCCCTGACCAATTTCAACCCTGAGGTCATGGCAAACCAGAAACGGCAGTGGTATCGGCTTCATCCTAAAAGTCTGGACTGTGTACATAATAAGGAGCCGACATCGCTCTTTGAACATTTTATGATTGTGGGGCTGCATCCAGATTCTAATTTGGAAGCCGTGGAGCACTCGTTTGCAAGAAAGAAGAAGTGGGAAAAGGAGAAGGGGAAACCTGAATTTCGAGATTGCAGAAAGCCTGAGCAACAAAAACTACCAGAACCAACTTTGGAACCTCAGTTACTGTTCAAATATCCTCCTGCAAAGAAGCTAGCAATGCGTATGAAGGATTTAGCTCCCTTTTGCTTTCCTGAAGGTGTTAAGGCAAGGTTGTTGGAGAGGACTCCATCTCTTAGTGAACTAAATGAACTTGTCTATGGACAGGAACATTTAGGAAAAGATGATCTTTCATTTGTCTTTACAGTAAAGGCAGCAGACAATACAACACTTTATGGAGTTTGCTTACATGTGCCCGAAATTGTTCAAAGCCCCCCTGGTATCTTAGGCATATCATCGCCTTTTTCTCATTCCTCTGGGGCACTCAGCCGTTTTCTGGTTTCTGCACCCCGCTGCTATTGTCTTCTGACTAGAGTTCCCTTCTTTGAGTTACACTTTGAGATGTTAAACAGTCTCATTGCACAGGAGCGCCTGAATCGGATAACACAGTTTATAAATGAGGTGACTCTCACTGGCAGCGGTCCATCATCGCCCAAACAAGATTATCAAATAAGGTCCAAGGCTGCAAACTCTCCAGAGATGGAGTCATCTAGTGAATGGATGGATTCTGCAATTCCTCTTGATGGTGCAACTGTTATTACTGCTGCAGCTGCTGGGATTATATCAGATGATGAAAGCCAACAGTTATCACCTAAATTACGGGATTGTCGCTGTCAATCTCCTGTAAGTGGGACTAGTAGTGATGCTTCAGATTTTGTTCATGTCAGGGATATAGATAAGGAGGACAAGAAGAATCTTCAAGTTCTTGATAATTGTGCGTTTAAGGCACCAGAAACTCTTGCTTCTATACAAAGAATGCATGGAAATTGTGAAAATGACCATGTTTCTCCGAAAGCTGGAACACCTTTGTCTCCTCGAAATCGTGGTTTGGAGCGTCTTGGAAGTTTTGAATCACTTTTCAGTCCAGTTAGAAGCATGACATCAGAAGATGAGGACGATTTTTTCTCAAACACCGAAAGAGATTATGGGGATGAATTGTTAATGGAATGGGCCATGGAGAATAAGAATGATTTGCTACAAATAGTGTGTAGATACCATGCTCAACCTATTCCACCTCGAGGAAGTGATTTTGTCTTCCACCCTCTCGAACATCTACAAGCTATTCAATACATACGACACTCAGTTGCTGCTCTTGGCTTCGATGATTGTCCAAACTGTTCTGAACCAGCTCAGGACAATATGAAGCTGGCAGCGGCTGAGGAAGCCCTATCATTATCAGTATGGACAATGGCGACTACATGTCGAGTTCTGTCCCTTGATAGTGTGATGACATTGATTACAGGAGTGTTGTTGGAAAAACAGGTGGTAATAGTGTGCCCAAATCTGGGTGTTCTATCTGCCACAGTGCTTTCTCTTATTCCCATGATTCGTCCTTTTCAGTGGCAGAGTTTATTGCTCCCAGTTTTACCTGGGAAAATGATTGATTTTCTTGATGCCCCAGTTCCATATATTGTTGGCATACAACATAAACCAGTTGACTTGAATATGAGAACTACTAATCTTGTTCTTGTTAATATACTGAAGGACCAGGTTGCAATGTGTCCATTACCAAAACTTCCACAGCATAAAGAGCTTCTCTCTCGGTTGAGTCCAATTCATGCTAGACTTTCAAATGAACGATCAATTGCTAGAAAGCATCCTGTACATAGGTGCAACGAAGTCCAGGCCGAAGCTTCAACTCAGTTTTTGAATATAATGTGGCACTATTTGGAGTCTCTTTGTTCGGATCTGAAATCCCACACGATAACTAGTGTACAATCAAATAACGATAGGGTTTCTTTACTTCTTAAAGATAGCTTCATTGATTCCTTTCCTGCTAGGGATCAACCATTCATTAAGCTTTTTGTAGATACACAGCTCTTCACTGTTTTATCCGACACTCGTTTGTCAAGCTTTGAGAGTGGCGAATCATAG 2475 0.4303 MKMDSKGEAEPQEERPSSPMRVLQHFSGGAFRVAGEAFQNMYSSGGSSMPQTGLGGHRRCQSELVSRGVQRTNSLQKLRSHVHRAWRWGGKSREEDSLTNFNPEVMANQKRQWYRLHPKSLDCVHNKEPTSLFEHFMIVGLHPDSNLEAVEHSFARKKKWEKEKGKPEFRDCRKPEQQKLPEPTLEPQLLFKYPPAKKLAMRMKDLAPFCFPEGVKARLLERTPSLSELNELVYGQEHLGKDDLSFVFTVKAADNTTLYGVCLHVPEIVQSPPGILGISSPFSHSSGALSRFLVSAPRCYCLLTRVPFFELHFEMLNSLIAQERLNRITQFINEVTLTGSGPSSPKQDYQIRSKAANSPEMESSSEWMDSAIPLDGATVITAAAAGIISDDESQQLSPKLRDCRCQSPVSGTSSDASDFVHVRDIDKEDKKNLQVLDNCAFKAPETLASIQRMHGNCENDHVSPKAGTPLSPRNRGLERLGSFESLFSPVRSMTSEDEDDFFSNTERDYGDELLMEWAMENKNDLLQIVCRYHAQPIPPRGSDFVFHPLEHLQAIQYIRHSVAALGFDDCPNCSEPAQDNMKLAAAEEALSLSVWTMATTCRVLSLDSVMTLITGVLLEKQVVIVCPNLGVLSATVLSLIPMIRPFQWQSLLLPVLPGKMIDFLDAPVPYIVGIQHKPVDLNMRTTNLVLVNILKDQVAMCPLPKLPQHKELLSRLSPIHARLSNERSIARKHPVHRCNEVQAEASTQFLNIMWHYLESLCSDLKSHTITSVQSNNDRVSLLLKDSFIDSFPARDQPFIKLFVDTQLFTVLSDTRLSSFESGES* 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1731 824 SMART DENN_cls 295 696 IPR001194 -
Pvu1g1731 824 Pfam uDENN domain 187 265 IPR005113 -
Pvu1g1731 824 Gene3D - 593 759 IPR043153 -
Pvu1g1731 824 MobiDBLite consensus disorder prediction 1 20 - -
Pvu1g1731 824 Gene3D - 121 342 - -
Pvu1g1731 824 MobiDBLite consensus disorder prediction 1 15 - -
Pvu1g1731 824 ProSiteProfiles Tripartite DENN domain profile. 169 822 IPR037516 -
Pvu1g1731 824 PANTHER SUPPRESSION OF TUMORIGENICITY 5 ST5 27 821 - -
Pvu1g1731 824 Pfam DENN (AEX-3) domain 593 694 IPR001194 -
Pvu1g1731 824 SMART uDENN_cls 129 266 IPR005113 -
Pvu1g1731 824 PANTHER BNAA09G10210D PROTEIN 27 821 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1731 Pvu-Chr1 42837551 42847182 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1731 - - pvu:PHAVU_001G167000g 1577.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1731 1 42837551 42847182 Pvu1g1731 1 42837551 42847182 ECH