Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1725 TTCCATAGATACTTGAAAGCATCAATCTGTGGGCTCCTATCAGCTTTAACTAGGCATTCATATGCAGACCTCACCGCTGTAGCAACGGAAGGCCAGAAAGAAAATTTGATAACAGATTACGTCCTAAGGATTTTAGGACTGGAGACATGTGCTGATACAGTTGTAGGAAATACAATGTTAAGAGGGATCTCTGGTGGACAAAAGAAACGCCTTACAGCAGGAGAGATGCTGGTTGGACCAGCTAAAGATCTATTCATGGATGAAATATCTACTGGTTTGGATAGCTCAACAACCTTCCAAATTGTGAATTCACTCAAGCATTTTGTTCACATTCTCAAAGGAACCACAGTCATCTCACTCCTGCAGCCAGCGCCCGAGACTTACAATCTTTTTGATGACATTATTCTACTCTCAGATAGTCATATAGTGTACCAGGGTCCCCGCGAATATGTGCTTCAATTTTTCGAATCAATGGGTTTTCAATGTCCCGAGAGGAAAGGTGTGGCAGACTTTTTGCAAGAAGTAACATCAAGGAAAGACCAGGAACAGTACTGGGCACACGAAGATCAACCTTATAGATTTGTCAGAGCGAAAGAATTCTCCGAGGCACTAAAGTCATTTCATGTTGGGAGAAGCCTTCGTGAAGAACTTGATAGTGAATTTGACAAGTCTAAGAGTCACCCAGCTGCTTTGACAACCAAAAAGTTTGGAGTGGGGAAATGGGAACTGTTAAAAGCTTGCTTATCTAGAGAATATTTACTTATGAAGCGCAATTCATTTGTTCACACCTTCAGGCTGAGCCAAGTTGCTGTAATGGCATTTATTACCATGACCATCTTCCTCCGGACTGAGATGCGCAGAGACTCAGTGATTGATGGCGGGATATATGTCGGTGCATTGTTCTTTGGCTTTATTGTGATTATGTTCAATGGACTTGCTGAAATTCCCATGGTTGTTTTAAAACTTCCTGTTTTCTACAAGCAAAGGGATAATCTGTTTTTTCCTTCATGGGCATATGCTCTGCCTGCATGGATCCTAAAAATCCCTATGACTTTTGTAGAAGTTGCCGTTTGGCTATTCCCAACCTACTATGTCATTGGATTTGACACAAATATTGGAAGATTTTTTAGACAATACCTAGTTCTTTTAGTGGTGAACCAGATGGCTTCCGCATTATTCCGATTTCTTGCAGGAGTAGGGAGGGAATTGAATGCAGCTTTAGCACTTGGGTCATTTACAGTGACCTTCCTTTTTCCTACGAGTGGTTTTATTCTATCAAAAGGCAACATAAAAAAGTGGTGGTTATGGAGCTTCTGGACATCACCTATGATGTATGGACAGAATGCTATGGTAAATAACGAGTTCCTTGCGGAGAGATGGAGACATGTTCTAACTAACTCTTCGGAGCCTCTTGGAGTCGAAGTTTTAAAATCACGGGGATTCTTCATCCAATCATATTGGTTTTGGATAGGCGTTGTGGTTTTGATTGGATATACATTACTTTTCAACTTTGGCTACATCCTTGCTCTTATGTATTTGAGTAGAATGGTTCTTCCTTTTGAACCACATTCTATCACCTTTGATGACGTAACATATGCTGTGGACATGCCACAGGAAATGAGGAACCAAGGACTTGTTGAGAATAATTTGGTTCTTTTGAAGGGTGTGAGTGGATCCTTCAGGCCAGGTGTTCTCACTGCTCTAATGGGTGTCACCGGAGCAGGCAAAACAACTCTGATGGATGTACTTGCTGGTAGAAAAACCGCAGGATATGTTGTAGGGAATATCACAATCTCTGGGTATCAGAAAAAGCAAGAAACATTTGCAAGAATTTCAGGATACTGTGAGCAAAACGACATCCACTCTCCTCATGTTACTGTGTATGAATCCTTGCTTTATTCAGCATGGCTCAGATTGTCCCCAGACATCAATGCTGAAACCAGAAAGATGTTCATTGAGGAAGTCATGGAACTTGTGGAACTGAAACCACTAAGGCATGCATTAGTAGGGTTGCCAGGTGTTAATGGTCTCTCAATAGAGCAACGTAAAAGGTTGACAATTGCAGTTGAACTTGTAGCAAATCCTTCCATAATATTCATGGATGAGCCAACTTCTGGGCTAGATGCAAGAGCAGCTGCTATTGTCATGAGAACGGTTAGGAACACGGTAGACACTGGAAGAACAGTTGTTTGTACCATCCATCAGCCTAGCATAGACATATTTGAATCATTTGATGAGATTTTTCTAATGAAGCAAGGGGGACAAGAGATATATGCGGGGCCACTTGGACGTCGTTCTTCCAATTTAATTAGTTACTTTGAGGAAATCCAAGGTATCGGTAAGATTAAAGATGGCTATAATCCAGCAACATGGATATTGGAAGTCACAAGTTCAGCAAAAGAAATGGAATTGGGGATTGATTTTGCTGAGGTGTATAAAAATTCAGAGTTATACAGAAGAACTAAAGCACTTGTTAAAGAATTGAGTACTCCATCTTCTGGTTCGAAAGACCTTTATTTTCCTTCACAGTACTCAACTTCATTTTTCACCCAATGCATGGCTTGCTTATGGAAACAACATTGGTCTTATTGGCGCAATTCTCAATACACTGCTCTAAGATTTCTATTCTCCACTACCGTAGCTGTTTTTCTTGGAAGCATGTTTTGGAACCTTGGCTCCAAAATTGAAAAGCAACAAGATCTTTTCAATGTCACGGGCTCCATGTATATTGCTGTTCTCCTGCTTAGTATGAAGAATTCTAGTGCAGTGCAGCCAGTAGTTACTGTTGAACGGACAGTCTTTTACAGGGAGAGAGCAGCTGGAATGTATTCAGCTTTTCCATATGCTTTTGCCCAGGTTCTGATTGAGCTCCCATATGTACTTGTACAAGCTGTAGTCTATAGCATTATAATTTATGCAATGGTTGGTTATGAGTGGACTGTGCCTAAATTTTTGTGGTGCCTATTCTTCATGTACTTTACCTTCCTGTACTTCACCTACTATGGAATGATGGCAGTGGCAGTGACCCCTAACCTACCCATCGCCAATACAGTTTCTTCAGGATTTTATGCAATGTGGAATATCTTCTCAGGATTCATAGTCCCACGGCCAAGGATCCCAGTATGGTGGAGGTGGTGCAGTTGGGCAAATCCAGTTTCTTGGAGTTTGTATGGATTGGTGGCTTCACAGTATGGAGATATAAAGCAAAGCCTTGAATCCATTACTTTGGTTTCAAGCATGATTTTCTTGGAGTGGTTGCAGTTGTGA 3267 0.412 FHRYLKASICGLLSALTRHSYADLTAVATEGQKENLITDYVLRILGLETCADTVVGNTMLRGISGGQKKRLTAGEMLVGPAKDLFMDEISTGLDSSTTFQIVNSLKHFVHILKGTTVISLLQPAPETYNLFDDIILLSDSHIVYQGPREYVLQFFESMGFQCPERKGVADFLQEVTSRKDQEQYWAHEDQPYRFVRAKEFSEALKSFHVGRSLREELDSEFDKSKSHPAALTTKKFGVGKWELLKACLSREYLLMKRNSFVHTFRLSQVAVMAFITMTIFLRTEMRRDSVIDGGIYVGALFFGFIVIMFNGLAEIPMVVLKLPVFYKQRDNLFFPSWAYALPAWILKIPMTFVEVAVWLFPTYYVIGFDTNIGRFFRQYLVLLVVNQMASALFRFLAGVGRELNAALALGSFTVTFLFPTSGFILSKGNIKKWWLWSFWTSPMMYGQNAMVNNEFLAERWRHVLTNSSEPLGVEVLKSRGFFIQSYWFWIGVVVLIGYTLLFNFGYILALMYLSRMVLPFEPHSITFDDVTYAVDMPQEMRNQGLVENNLVLLKGVSGSFRPGVLTALMGVTGAGKTTLMDVLAGRKTAGYVVGNITISGYQKKQETFARISGYCEQNDIHSPHVTVYESLLYSAWLRLSPDINAETRKMFIEEVMELVELKPLRHALVGLPGVNGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEIFLMKQGGQEIYAGPLGRRSSNLISYFEEIQGIGKIKDGYNPATWILEVTSSAKEMELGIDFAEVYKNSELYRRTKALVKELSTPSSGSKDLYFPSQYSTSFFTQCMACLWKQHWSYWRNSQYTALRFLFSTTVAVFLGSMFWNLGSKIEKQQDLFNVTGSMYIAVLLLSMKNSSAVQPVVTVERTVFYRERAAGMYSAFPYAFAQVLIELPYVLVQAVVYSIIIYAMVGYEWTVPKFLWCLFFMYFTFLYFTYYGMMAVAVTPNLPIANTVSSGFYAMWNIFSGFIVPRPRIPVWWRWCSWANPVSWSLYGLVASQYGDIKQSLESITLVSSMIFLEWLQL* 1089
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1725 1088 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 25 1074 - -
Pvu1g1725 1088 CDD ABCG_PDR_domain2 522 760 IPR034003 -
Pvu1g1725 1088 Pfam ABC-2 type transporter 850 1064 IPR013525 GO:0016020|GO:0140359
Pvu1g1725 1088 Pfam ABC-2 type transporter 243 455 IPR013525 GO:0016020|GO:0140359
Pvu1g1725 1088 SMART AAA_5 562 754 IPR003593 -
Pvu1g1725 1088 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 525 777 IPR003439 GO:0005524
Pvu1g1725 1088 PANTHER ATP-BINDING CASSETTE TRANSPORTER 25 1074 - -
Pvu1g1725 1088 Pfam ABC transporter 553 705 IPR003439 GO:0005524
Pvu1g1725 1088 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 541 757 IPR027417 -
Pvu1g1725 1088 Pfam Plant PDR ABC transporter associated 460 515 IPR013581 -
Pvu1g1725 1088 Gene3D - 525 767 IPR027417 -
Pvu1g1725 1088 Gene3D - 15 204 IPR027417 -
Pvu1g1725 1088 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 41 176 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1725 Pvu-Chr1 42782738 42788443 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1725 K08711 - pvu:PHAVU_001G166400g 2171.74