Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1724 ATGGAGGGTGGGGGTAGTTTCAGGAATGGTAGTTCATCCATTTGCAGGGACAGTGATAAGGATATCTTCTCAAACTCATTGCACAAAGAGGATGATGAAGAGGCTCTCAAATGGGCTGCCATTCAGAAACTTCCCACCGTTTCGCGTATGAGGAAAGCTTTGTTCACTTCATCCGAAGGGGAAGTGAATGAGATTGATGTGCACAAACTTGGGTTGCAAGAAAGGAGAGCTTTACTTGAAAGACTGATCAGAACTGCTGAAGAGGACAATGAGAAGTTTTTGCTCAAGTTAAGGGAACGAATTGATAGAGTTGGAATTGATCTTCCGACAATAGAGGTTCGGTTTGAGAACTTGAATGTCGAAGCAGAAGCTAGTGTAGGAACTAGAGCTTTGCCTACTTTCGCTAACTTCATGGTTAATATTGTAGAGGGTTTGTTGAACTCTCTTCATATTCTACAAAGTAGAAAACAACATATACATATTCTCCGGGATGTCAGTGGAATAATAAAGCCTGGCAGAATGACATTACTTTTGGGCCCTCCAAGTTCTGGAAAAACCACACTATTGTTGGCCTTGGCAGCAAGACTTGATCCAAAGTTAAAGTTTTCTGGAAAGGTGACTTATAATGGTCATGCGATGGATGAGTTTGTACCCCAAAGAACTGCAGCATATGTCAATCAAAATGATCTTCATATTGCAGAGTTGACTGTCAGAGAAACCCTGGCCTTCTCTGCAAGAGTCCAAGGAGTTGGACCTCGTTATGATTTACTTGCAGAATTGTCGAGAAGAGAAAAAGAGGCAAATATCATGCCTGATCCAGATATTGATGTCTACATGAAGGCTGTAGCAACTGAAGGCCAGAAAGCAAATTTGATAACAGATTACGTCCTAAGGATTTTAGGACTGGAGACATGTGCTGATACCGTTGTAGGAAATACAATGCTAAGGGGAATCTCTGGTGGACAAAAGAAACGCCTTTCAACAGGAGAGATGCTGGTTGGACCAGCTAAAACTCTATTCATGGATGAAATATCTACTGGTTTGGATAGCTCAACAACCTTCCAAATTGTGAATTCACTCAAGCATTGTGTTCACATTCTCAAAGGAACCACAGTCATCTCACTCCTGCAGCCAGCGCCGGAGACTTACAATCTTTTTGATGACATTATTCTACCCTCTGATAGTCATATAGTGTACGAAGGTCCCCGTGAATATGTGCTTAAATTTTTCGAATCAATGGGTTTTCAATGTCCCGAGAGAAAAGGTGTGGCAGACTTTTTGCAAGAAGTAACATCAAGGAAAGACCAGGAACAGTACTGGGCACATAAAGATCAACCTTATAGATTTGTCAGAGCTAAAGAATTCTCAGAGGCACTCAAGTCATTTCATGTTGGGAGAAGCCTTCGAGAAGAACTTGATAGTGAATTTGACAAGTCTAAGAGTCACCCAGCTGCTTTGACAACCAAAAAGTTTGGAGTGGGGAAATGGGAACTGTTAAAAGCTTGCTTATCTAGAGAATATTTACTTATGAAGCGCAATTCATTTGTTCACACCTTCCGGTTGAGCCAACTTGCTGTAATGGCATTTATTGCCATGACCATCTTCCTCCGAACTGAGATGCACAGAGACTCTGTGACTGATGGCGGGATATATGTCGGTGCACTGTTCTTTGGCCTTGTTGTGATTATGTTCAATGGACTTGCTGAACTTCCCATGGTCGTTTTAAAGCTTCCTGTTTTCTACAAGCAAAGGGATAATCTGTTTTTTCCTTCATGGGCATATGCTCTGCCTGCATGGATTCTAAAAATCCCTATGAGTTTTGTAGAAGTTGCCGTCTGGCTATTCCTAACCTATTATGTCATTGGATTTGATCCAAATATTGGAAGATTTTTTAGACAATACCTTGTTCTTTTAGTGGTGAACCAGATGGCTTCCGCATTATTCCGATTTCTTGCAGGAGTTGGGAGGGAATTGGATGCAGCTTTAGCACTTGGGTCATTTACAGTGACCTTCCTTTTTGGTACGAGTGGTTTTATCCTATCAAAAGACAACATAAAAAAGTGGTGGTTATGGAGCTTCTGGATATCACCTATGATGTATGGACAGAATGCTATGGTAAATAACGAGTTCCTTGCGGAGAGATGGAGACATGTTCTACCTAACTCTTCGGAGCCTCTTGGAGTCGAAGTTTTGAAATCACGGGGATTCTTCATCCAATCATATTGGTTTTGGATAGGCGTTGTGGTTTTGATTGGATATACATTACTTTTCAACTTTGGCTACATCCTTGCTCTTACGTATTTGAGCACACCTGGGAAGCAACATGCATTTATAGCCGAAGAACCTGAAAACAATGAAAAAAATGGTGGTATGAGATACAAAAAAGATAACTTCACTGATCACTCAATTAAAGTGAGAAATGATGGAAGTATATGTGGAAATACATCTTCTCATTCTTTTACCACTGGCTACAGAGGAATGGTTCTTCCTTTTGAACCACATTCTATCACCTTTGATGAAGTAACATATGCTGTGGACATGCCACAGGAAATAAGAAACCAAGGAGTTGTTGAGAATAAATTGGTTCTTTTGAAGGGTGTCAGTGGATTCTTCAGGCCAGGTGTTCTCACTGCTCTAATGGGTGTCACTGGAGCAGGCAAAACAACTCTGATGGATGTACTTGCCGGTAGAAAAACTTCAGGATATGTTGTAGGGAACATCACAATCTCTGGGTATCAGAAGAAGCAAGAAACATTTGCAAGAATTTCAGGATACTGTGAGCAAAACGACATCCACTCTCCTCATGTTACTGTGTATGAATCCTTGCTTTATTCAGCATGGCTCAGATTGTTCCCAGACATCAATGCTGAAACCAGAAAGATGTTCATTGAGGAAGTCATGGAACTTGTGGAATTGAAACCACTAAGGCATGCATTAGTGGGATTGCCAGGTGTTAATGGTCTCTCAATAGAGCAACGTAAAAGGTTGACAATTGCAGTTGAACTTGTAGCAAATCCTTCCATAATATTCATGGATGAGCCAACTTCTGGGCTAGATGCAAGAGCAGCTGCTATTGTCATGAGAACGGTTAGGAACACGGTAGACACTGGAAGAACAGTTGTTTGTACCATCCATCAGCCTAGCATAGACATATTTGAATCATTTGATGAGATTTTTCTAATGAAGCAAGGGGGGCAAGAGATATATGCGGGGCCACTTGGACGTCGTTCTTCCAATTTAATTAGTTACTTTGAGGAAATCCAAGGTATCGGTAAGATTAAAGATGGCTATAATCCAGCAACATGGATGTTGGAAGTCACAAGTTCAGCAAAAGAAAAGGATTTGGGGATTGATTTTGCCGAGGTGTATAAAAATTCGGAGTTATACAGGAGAACTAAAGCACTTGTTAAAGAATTAAGTACTCCATCTCTGGGTTCGAAAGACCTTTATTTTCCTTCAAAGTGCTCAACTTCCTTCTTCACCCAATGCATGGCTTGCTTGTGGAAACAACATTGGTCTTACTGGCGCAATTCTCAATACACTGCTCTAAGATTTCTATTCTCCACTATTGTAGCTGTTTTGCTTGGAAGCATGTTTTGGAACCTTGGCTCCAAAATTGAAAAGCAACAAGATCTTTTCAATGTCATGGGCTCCATGTATGCTTCTGTTCTCCTTCTTAGTATGAAGAATTCTGGTGCAGTGCAGCCAGTAGTTGCTGTTGAGCGGACAGTCTTTTACAGGGAGAGAGCAGCTGGAATGTATTCAGCTTTTCCATATGCTTTTGCCCAGGTTCTGATTGAGCTGCCGTATGTACTTGGACAAGCTGTAGTCTATAGTATTATAATTTATGCAATGATTGGTTATGAGTGGACTGTGGCTAAATTTTTGTGGTGCCTATTCTTCATGTTCTTTACCTTCCTGTACTTCACCTACTATGGAATGATGGCAGTGGCATTGACCCCTAACCAACACATCTCCACTATAGTTTCTTCAGGATTTTATGCAGTGTGGAATATCTTCTCAGGATTCATAATCCCACGGCCTAGGATCCCAGTATGGTGGAGGTGGTACAGTTGGGCAAATCCAATTTCTTGGAGTTTGTATGGTTTGGTGGCTTCACAGTATGGAGATATAAAGCAAAGCATTGAATCCAGTGATGGGACAACAACAGTAGAAGGCTTTGTGAGAAGTTACTTTGGTTTCAAGCCTGATTTTCTTGGAGTGGTTGCAGCTGTGATGGTTGCATTCACAGTAGTTTTTGCATTGGTCTTTGCTATATCCGTGAAAATGTTTAATTTTCAGCGGCGTTAG 4311 0.4113 MEGGGSFRNGSSSICRDSDKDIFSNSLHKEDDEEALKWAAIQKLPTVSRMRKALFTSSEGEVNEIDVHKLGLQERRALLERLIRTAEEDNEKFLLKLRERIDRVGIDLPTIEVRFENLNVEAEASVGTRALPTFANFMVNIVEGLLNSLHILQSRKQHIHILRDVSGIIKPGRMTLLLGPPSSGKTTLLLALAARLDPKLKFSGKVTYNGHAMDEFVPQRTAAYVNQNDLHIAELTVRETLAFSARVQGVGPRYDLLAELSRREKEANIMPDPDIDVYMKAVATEGQKANLITDYVLRILGLETCADTVVGNTMLRGISGGQKKRLSTGEMLVGPAKTLFMDEISTGLDSSTTFQIVNSLKHCVHILKGTTVISLLQPAPETYNLFDDIILPSDSHIVYEGPREYVLKFFESMGFQCPERKGVADFLQEVTSRKDQEQYWAHKDQPYRFVRAKEFSEALKSFHVGRSLREELDSEFDKSKSHPAALTTKKFGVGKWELLKACLSREYLLMKRNSFVHTFRLSQLAVMAFIAMTIFLRTEMHRDSVTDGGIYVGALFFGLVVIMFNGLAELPMVVLKLPVFYKQRDNLFFPSWAYALPAWILKIPMSFVEVAVWLFLTYYVIGFDPNIGRFFRQYLVLLVVNQMASALFRFLAGVGRELDAALALGSFTVTFLFGTSGFILSKDNIKKWWLWSFWISPMMYGQNAMVNNEFLAERWRHVLPNSSEPLGVEVLKSRGFFIQSYWFWIGVVVLIGYTLLFNFGYILALTYLSTPGKQHAFIAEEPENNEKNGGMRYKKDNFTDHSIKVRNDGSICGNTSSHSFTTGYRGMVLPFEPHSITFDEVTYAVDMPQEIRNQGVVENKLVLLKGVSGFFRPGVLTALMGVTGAGKTTLMDVLAGRKTSGYVVGNITISGYQKKQETFARISGYCEQNDIHSPHVTVYESLLYSAWLRLFPDINAETRKMFIEEVMELVELKPLRHALVGLPGVNGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEIFLMKQGGQEIYAGPLGRRSSNLISYFEEIQGIGKIKDGYNPATWMLEVTSSAKEKDLGIDFAEVYKNSELYRRTKALVKELSTPSLGSKDLYFPSKCSTSFFTQCMACLWKQHWSYWRNSQYTALRFLFSTIVAVLLGSMFWNLGSKIEKQQDLFNVMGSMYASVLLLSMKNSGAVQPVVAVERTVFYRERAAGMYSAFPYAFAQVLIELPYVLGQAVVYSIIIYAMIGYEWTVAKFLWCLFFMFFTFLYFTYYGMMAVALTPNQHISTIVSSGFYAVWNIFSGFIIPRPRIPVWWRWYSWANPISWSLYGLVASQYGDIKQSIESSDGTTTVEGFVRSYFGFKPDFLGVVAAVMVAFTVVFALVFAISVKMFNFQRR* 1437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1724 1436 Coils Coil 69 89 - -
Pvu1g1724 1436 Gene3D - 837 1078 IPR027417 -
Pvu1g1724 1436 Pfam ABC-transporter N-terminal 80 137 IPR029481 -
Pvu1g1724 1436 Pfam ABC transporter 162 344 IPR003439 GO:0005524
Pvu1g1724 1436 Pfam ABC transporter 864 1016 IPR003439 GO:0005524
Pvu1g1724 1436 Pfam Plant PDR ABC transporter associated 715 778 IPR013581 -
Pvu1g1724 1436 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 1 1436 - -
Pvu1g1724 1436 SMART AAA_5 171 403 IPR003593 -
Pvu1g1724 1436 SMART AAA_5 873 1065 IPR003593 -
Pvu1g1724 1436 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 851 1068 IPR027417 -
Pvu1g1724 1436 Gene3D - 148 459 IPR027417 -
Pvu1g1724 1436 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 157 419 IPR027417 -
Pvu1g1724 1436 CDD ABCG_PDR_domain2 833 1071 IPR034003 -
Pvu1g1724 1436 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 836 1088 IPR003439 GO:0005524
Pvu1g1724 1436 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 146 419 IPR003439 GO:0005524
Pvu1g1724 1436 Pfam ABC-2 type transporter 498 710 IPR013525 GO:0016020|GO:0140359
Pvu1g1724 1436 Pfam ABC-2 type transporter 1161 1375 IPR013525 GO:0016020|GO:0140359
Pvu1g1724 1436 PANTHER ATP-BINDING CASSETTE TRANSPORTER 1 1436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1724 Pvu-Chr1 42757811 42765845 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1724 K08711 - gmx:732607 2382.06