Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1723 ATGCCTGATCCAGATATTGATGCCTACATGAAGGCTGTAGCAACGGAAGGCCAGAAAACAACTTTGATAACAGATTACGTCCTAAGGATTTTAGGACTGGAGACATGTGCTGATACAGTTGTAGGAAATACAATGTTAAGGGCATCTCTGGTGGACAAAAGAAACGCCATACAACAGGGTCCCCGCGAATATGTGCTTCAATTTTTCCAATCAATGGGTTTTCAACGTCCTGAGAGGAAAGGTGTGGCAGACTTTTTGCAAGAAGTAACATCAAGGAATGACCAGGAACAGTACTGGGCACACAAAGATCAACCTTATAGATTTGTCAGAGCGAAAGAATTCTCCGAGGCACTCAAGTCATTTCATGTTGGGAGAAGCCTTCGTGAAGAACTTGATAGTGAATTTGACAGGTCTAAGAGTCACCCAGCTGCTTTGAATACCAAAAAGTTTGGAGTGGGCAAATGGGAACTGTTAAAAGCTTGCTTATCAAGTGAATATTTACTTATGAAGCGCAACTCATTTGTTTACATCTTCCGGTTGAGCCAAGTAGCTTGTCCCTCCATTTACCTTGCTGTAATGGCATTTATTGCCATGACCATCTTCCTCCGGACTAAGATGTGCAGAGACTCTGTGACCGATGGCGGGATATATGTCGGTGCATTGTTCTTTGGCCTTGCTGTGATTATGTTCAATGGACTTGCTGAACTTCCCATGGTCGTTTTAAAGCTTCCTGTTTTCTACAAGCAAAGGGATAATCTGTTTTTTCCTTCATGGGCATATGCTCTGCCTGCATGGATCCTAAAAATCCCTATGACTTTTGTAGAAGTTGCCGTTTGGCTATTCCTAACCTACTATGTCATTGGATTTGATCCAAATATTGGAAGACAACATAAAAAAAAGTGGTGGTTATGGGGCTTCTGGATATCACCTAAGATGTATGGACAGAATGCTATGGTAAATAACGAGTTCCTTGCGGAGAGATGGAGATATGTTCTACCTAACTCTTCGGAGCCTCTTGGAGTCGAAGTTTTGAAATCACGGGGATTCTTCATCCAATCATATTGGATTTGGATAGGCGTTGTGGTTTTGATTGGATATACATTACTTTTCAACTTTGGCTACATCCTTTCTCTTACGTATATGAGCACACCTGAGAAGCGACATGCTTTTATATCCGAAGAACCTGAAAACAATGAGCAAAATGGTGGTAGTAATAAAGTGAGAAATGACGAAAGTATATGTGGAAATACATCTTCTCATGCTTTTCCCTCTAGCTATAGAGGAATGGTTCTTCCTTTTGAACCACATTCTATCACCTTTGATGACGTAACATATGCTGTGGACATGCCACAGGTGTTGGGTGTCACCGGAGCAGGCAAGACAACTCTGATGGATGTACTTGCTGGTAGAAAAACTGCAGGATATGTTTTAGGGAACATCACAATCTCTGGGTATCAGAAAAAGCAAGAAACATTTGCAAGAATTTCAGTATACTGTGAGCAAAACGACATCCACTCTCCTAATGTTACTGTGTATGAATCCTTGCTTTATTCAGCATGGCTCAGATTGTCCCCAGACATCAATGCTCAAACTAGAAAGATGTTCATTGAGGAAGTCATGGAACTGGTGGAATTGAAACCACTAAGGCATGTATTCATGGATGAACCAACTTCTGGACTAGATGCAAGAGCAGCAACTATTGTCATGAGGACGGTTAGGAACACTGTAGACACTGAAAGAACAGTTGTTTGTACCATCCATCAGCCTATCATAGACATATTTGAATCATTTGATGAGGTGAAACAAAATCAGTGTAGCAAATTTATTCTGCTTTCTGTAACCAAGTTTCTAACCCTTTTGTCATGA 1866 0.4105 MPDPDIDAYMKAVATEGQKTTLITDYVLRILGLETCADTVVGNTMLRASLVDKRNAIQQGPREYVLQFFQSMGFQRPERKGVADFLQEVTSRNDQEQYWAHKDQPYRFVRAKEFSEALKSFHVGRSLREELDSEFDRSKSHPAALNTKKFGVGKWELLKACLSSEYLLMKRNSFVYIFRLSQVACPSIYLAVMAFIAMTIFLRTKMCRDSVTDGGIYVGALFFGLAVIMFNGLAELPMVVLKLPVFYKQRDNLFFPSWAYALPAWILKIPMTFVEVAVWLFLTYYVIGFDPNIGRQHKKKWWLWGFWISPKMYGQNAMVNNEFLAERWRYVLPNSSEPLGVEVLKSRGFFIQSYWIWIGVVVLIGYTLLFNFGYILSLTYMSTPEKRHAFISEEPENNEQNGGSNKVRNDESICGNTSSHAFPSSYRGMVLPFEPHSITFDDVTYAVDMPQVLGVTGAGKTTLMDVLAGRKTAGYVLGNITISGYQKKQETFARISVYCEQNDIHSPNVTVYESLLYSAWLRLSPDINAQTRKMFIEEVMELVELKPLRHVFMDEPTSGLDARAATIVMRTVRNTVDTERTVVCTIHQPIIDIFESFDEVKQNQCSKFILLSVTKFLTLLS* 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1723 621 Gene3D - 439 546 IPR027417 -
Pvu1g1723 621 Pfam ABC transporter 451 557 IPR003439 GO:0005524
Pvu1g1723 621 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 449 589 IPR027417 -
Pvu1g1723 621 PANTHER ATP-BINDING CASSETTE TRANSPORTER 54 298 - -
Pvu1g1723 621 PANTHER ATP-BINDING CASSETTE TRANSPORTER 551 600 - -
Pvu1g1723 621 PANTHER ATP-BINDING CASSETTE TRANSPORTER 1 48 - -
Pvu1g1723 621 PANTHER ATP-BINDING CASSETTE TRANSPORTER 297 451 - -
Pvu1g1723 621 PANTHER ATP-BINDING CASSETTE TRANSPORTER 452 550 - -
Pvu1g1723 621 Pfam ABC-2 type transporter 157 292 IPR013525 GO:0016020|GO:0140359
Pvu1g1723 621 Pfam Plant PDR ABC transporter associated 328 391 IPR013581 -
Pvu1g1723 621 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 297 451 - -
Pvu1g1723 621 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 551 600 - -
Pvu1g1723 621 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 1 48 - -
Pvu1g1723 621 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 54 298 - -
Pvu1g1723 621 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 452 550 - -
Pvu1g1723 621 Gene3D - 547 602 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1723 Pvu-Chr1 42746170 42751198 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1723 K08711 - pvu:PHAVU_001G166200g 926.776