Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1721 ATGGAGGGTGGGGGTAGTTTCAGGAATGGTAGTTCATCCATTTGCAGGGACAGTGATAAGGATATCTTCTCAAACTCATTGCACAAAGAGGATGATGAAGAGGCTCTCAAATGGGCTGCCATTCAGAAACTTCCCACCGTTTCGCGTATGAGGAAAGCTTTGTTCACTTCACCCGAAGGAGAAGTGAATGAGATTGATGTGCACAAACTTGGGTTGCAAGAAAGAAGAGTTTTACTTGAAAGACTGATCAGAACTGCTGAAGAGGACAATGAGAAGTTTTTGCTCAAGTTAAGGGAACGAATTGATAGAGTTGGAATTGATCTTCCGATAATAGAGGTGCGGTTTGAGAACTTGAATGTGGAAGCAGAAGCTAGTGTAGGAACTAGAGCTTTGCCTACCTTCGCTAACTTCATGGTGAATATTGTGGAGGGTATGTTGAACTCTCTTCATATTCTACAAAGTAGAAAACAACATATACATATTCTCCAGGATGTCAGTGGAATAATAAAGCCTGGCAGAATGACATTACTTTTGGGCCCTCCAAGTTCTGGAAAAACCACACTATTGTTGGCCTTGGCAGCAAGACTTGATCCAAAGTTAAAGTTTTCTGGAAAGGTGACTTATAATGGTCATGCGATAGATGAGTTTGTACCCCAAAGGACTGCAGCATATGTCAATCAAAATGATCTTCATATTGCAGAGTTGACGGTCAGAGAAACCTTAACCTTCTCAGCAAGAGTCCAAGGAGTTGGAACTCGTTATGATTTGCTTGCAGAATTGTCGAGAAGAGAAAAAGAGGCAAATATCATACCTGATCCAGATATTGATATCTACATGAAGGCTGTAGCAACTGAAGGCCAGAAAGCAAATTTGATAACAGATTACATCCTAAGGATTTTAGGACTAGAGATATGTGCTGATACCGTTGTAGGAAATACAATGTTAAGGGGAATCTCTGGTGGACAAAAGAAACGCCTTACAACAGGAGAGATGCTGGTTGGACCAGCTAAAGCTCTATTCATGGATGAAATATCTACTGGTTTGGATAGCTCAACAACCTTCCAAATTGTGAATTCACTCAAGCAATGTGTTCACATTCTCAAAGGAACAACAGTCATCTCACTCCTGCAGCCAGCGCCCGAGACTTACAATCTTTTTGATGACATTATTCTACTCTCTGATAGTCATATAGTGTACCAGGGTCCCCGCGAATATGTGCTTCAATTTTTCCAATCAATGGGTTTTCAATGTCCTGAGAGGAAAGGTGTGGCAGACTTTTTGCAAGAAGTAACATCAAGGAAAGACCAGGAACAGTACTGCACACACAAAGATCAACCTTATAGATTTGTCACAGCCAAAGAGTTCTCAGAGGCACTCAAGTCATTTCATGTTGGGAGAAGTCTTCGTGAAGAACTTGATAGTGAATTTGACAGGTCTAAGAGTCACCCAGCTGCTTTGACAACCAAAAAGTTTGGAGTGGGGAAATGGGAACTGTTAAAAGCTTGCTTATCAAGAGAATATTTACTTATGAAGCGCAATTCATTTGTTTACATCTTCCGGTGGAGCCAACTTGCTGTAATGGCATTTATTGCCATGACCATCTTCCTTCGGACTGAGATGCGCAGAGACTCTGTGACTGATGGCGGGATATATGTCGGTGCATTGTTCTTTGGCCTTGCTGTGATTATGTTCAATGGACTTGCTGAACTTCCCATGGTCGTTTTAAAGCTTCCTGTTTTCTACAAGCAAAGGGATAATCTGTTTTTTCCTTCATGGGCATATGCTCTGCCTGCATGGATCCTAAAAATCCCTATAACTTTTCTAGAAGTTGCTGTATTTTTTAGACAATACCTTGTTCTTTTAGTGGTGAACCAGATGGCTTCCGCATTATTCCGATTTCTTGCAGGAGTTGGGAGGGAATTGGATGCAGCTTTAGCACTTGGGTCATTTACAGTGACCTTCCTTTTTGGTACGAGTGGTTTTATCCTATCAAAAGACAACATAAAAAAATGGTGGTTATGGGGCTTCTGGATATCACCTATGATGTACGGACAGAATGCTATGGTAAATAACGAGTTCCTTGCAGAGAGATGGAGGCATGTTCTACCAAACTCCACGGAGCCTCTTGGAATCGAAGTTTTGAAATCACGGGGATTCTTCATCCAATCATATTGGTTTTGGATAGGCGTTCTGGTTTTGATTGGATATACATTACTTTTTAACTTTGGCTACATCCTTGCTCTTACGTATTTGAGCACACCCGGGAAGCAACATGCATTTATATCCGAAGAACTTGAAAACAATGAGCAAAATGGTGGTAGTAATAAAGGAATTAATGCGATGAGATACATAAAATATAACTTCACTGATCACTCAATTAAAGGAATGGTTCTTCCTTTTGAACCACATTCTATCACCTTTGATGAAGTAATATATGCTGTGGACATGCCACAGGAAATGAGGAACCAAGGAGTTGTTGAGAATAAATTGGTTCTTTTGAAGGGTGTCAGTGGATCCTTCAGGCCAGGTGTTCTCACTGCTCTAATGGGTGTCACCGGAGCAGGCAAAACAACTCTGATGGATGTACTTGCTGGTAGAAAAACCGCAGGATATGTTGTAGGGAATATCACAATCTCTGGGTATCAGAAAAAGCAAGAAACATTTGCAAGAATTTCAGGATACTGTGAGCAAAACGACATCCACTCTCCTCATGTTACTGTGTATGAATCCTTGCTTTATTCAGCATGGCTCAGATTGTCCCCAGACATCAATGCTGAAACCAGAAAGATGTTCATTGAGGAAGTCATGGAACTTGTGGAACTGAAACCACTAAGGCATGCATTAGTAGGGTTGCCAGGTGTTAATGGTCTCTCAATAGAGCAACGTAAAAGGTTGACAATTGCAGTTGAACTTGTAGCAAATCCTTCCATAATATTCATGGATGAGCCAACTTCTGGGCTAGATGCAAGAGCAGCTGCTATTGTCATGAGAACGGTTAGGAACACGGTAGACACTGGAAGAACAGTTGTTTGTACCATCCATCAGCCTAGCATAGACATATTTGAATCATTTGATGAGATTTTTCTAATGAAGCAAGGGGGGCAAGAGATATATGCGGGGCCACTTGGACTTCGTTCTTCCAATTTAATTAGTTACTTTGAGGAAATCCAAGGTATCGATAAGATTAAAGATGGCTATAATCCAGCAACATGGATGTTGGAAGTCACAAGTTCAGCAAAAGAAAAGGATTTGGAGATTGATTTTGCCGAGGTGTATAAAAATTCGGAGTTATACAGGAGAACTAAAGCACTTGTTAAAGAATTGAGTACTCCATCTCCTGGTTCAAAAGACCTTTATTTTTCTTCACAGTACTCAACTTCCTTCTTCACCCAATGCATGGCTTGCTTATGGAAACAACATTGGTCTTACTGGCGCAATTCTCAATACACTGTTTTAAGATTTCTATTCTCCACTACTGTAGCTGTTTTGCTTGGAAGCATGTTTTGGAACCTTGGCTCCAAAATTGAAAAGCAACAAGATCTTTTCAATGTCATGGGCTCCATGTATGCTGCTGTTATCCTTCTTAGTATTAAGAATTCTAGTGCTGTGCAGCCAGTAGTTGCTGTTGAGCGGACAGTCTTTTACAGGGAGAGAGCAGCTGGAATGTATTCAGCTTTTCCATATGCTTTTGCCCAGGTTCTGATTGAGCTCCCGTATGTACTTGGACAAGCTGTAGCCTATAGCATTATAATTTATGCGATGATTGGTTATGAGTGGACTGTGGCTAAATTTTTCTGGTGCCTATTCTTCATGTACTTTACCTTCCTATACTTCACCTACTATGGAATGATGGCAGTGGCATTGACCCCTAACGAACACATCTCCACTATAGTTTCTTCAGGATTTTATGCGGTGTGGAATATCTTCTCAGGATTCATAGTCCCACGGCCAGTAAGTTTAGTCTTTCATATTTAG 3975 0.4093 MEGGGSFRNGSSSICRDSDKDIFSNSLHKEDDEEALKWAAIQKLPTVSRMRKALFTSPEGEVNEIDVHKLGLQERRVLLERLIRTAEEDNEKFLLKLRERIDRVGIDLPIIEVRFENLNVEAEASVGTRALPTFANFMVNIVEGMLNSLHILQSRKQHIHILQDVSGIIKPGRMTLLLGPPSSGKTTLLLALAARLDPKLKFSGKVTYNGHAIDEFVPQRTAAYVNQNDLHIAELTVRETLTFSARVQGVGTRYDLLAELSRREKEANIIPDPDIDIYMKAVATEGQKANLITDYILRILGLEICADTVVGNTMLRGISGGQKKRLTTGEMLVGPAKALFMDEISTGLDSSTTFQIVNSLKQCVHILKGTTVISLLQPAPETYNLFDDIILLSDSHIVYQGPREYVLQFFQSMGFQCPERKGVADFLQEVTSRKDQEQYCTHKDQPYRFVTAKEFSEALKSFHVGRSLREELDSEFDRSKSHPAALTTKKFGVGKWELLKACLSREYLLMKRNSFVYIFRWSQLAVMAFIAMTIFLRTEMRRDSVTDGGIYVGALFFGLAVIMFNGLAELPMVVLKLPVFYKQRDNLFFPSWAYALPAWILKIPITFLEVAVFFRQYLVLLVVNQMASALFRFLAGVGRELDAALALGSFTVTFLFGTSGFILSKDNIKKWWLWGFWISPMMYGQNAMVNNEFLAERWRHVLPNSTEPLGIEVLKSRGFFIQSYWFWIGVLVLIGYTLLFNFGYILALTYLSTPGKQHAFISEELENNEQNGGSNKGINAMRYIKYNFTDHSIKGMVLPFEPHSITFDEVIYAVDMPQEMRNQGVVENKLVLLKGVSGSFRPGVLTALMGVTGAGKTTLMDVLAGRKTAGYVVGNITISGYQKKQETFARISGYCEQNDIHSPHVTVYESLLYSAWLRLSPDINAETRKMFIEEVMELVELKPLRHALVGLPGVNGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEIFLMKQGGQEIYAGPLGLRSSNLISYFEEIQGIDKIKDGYNPATWMLEVTSSAKEKDLEIDFAEVYKNSELYRRTKALVKELSTPSPGSKDLYFSSQYSTSFFTQCMACLWKQHWSYWRNSQYTVLRFLFSTTVAVLLGSMFWNLGSKIEKQQDLFNVMGSMYAAVILLSIKNSSAVQPVVAVERTVFYRERAAGMYSAFPYAFAQVLIELPYVLGQAVAYSIIIYAMIGYEWTVAKFFWCLFFMYFTFLYFTYYGMMAVALTPNEHISTIVSSGFYAVWNIFSGFIVPRPVSLVFHI* 1325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1721 1324 Pfam ABC-transporter N-terminal 86 137 IPR029481 -
Pvu1g1721 1324 PANTHER ATP-BINDING CASSETTE TRANSPORTER 1 1318 - -
Pvu1g1721 1324 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 820 1041 IPR027417 -
Pvu1g1721 1324 SMART AAA_5 842 1034 IPR003593 -
Pvu1g1721 1324 SMART AAA_5 171 396 IPR003593 -
Pvu1g1721 1324 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 805 1057 IPR003439 GO:0005524
Pvu1g1721 1324 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 1 1318 - -
Pvu1g1721 1324 CDD ABCG_PDR_domain2 802 1040 IPR034003 -
Pvu1g1721 1324 Pfam Plant PDR ABC transporter associated 698 761 IPR013581 -
Pvu1g1721 1324 Pfam ABC-2 type transporter 377 492 IPR043926 GO:0140359
Pvu1g1721 1324 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 157 419 IPR027417 -
Pvu1g1721 1324 CDD ABCG_PDR_domain1 151 401 IPR034001 -
Pvu1g1721 1324 Pfam ABC-2 type transporter 1130 1317 IPR013525 GO:0016020|GO:0140359
Pvu1g1721 1324 Pfam ABC-2 type transporter 498 693 IPR013525 GO:0016020|GO:0140359
Pvu1g1721 1324 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 146 419 IPR003439 GO:0005524
Pvu1g1721 1324 Pfam ABC transporter 162 344 IPR003439 GO:0005524
Pvu1g1721 1324 Pfam ABC transporter 833 985 IPR003439 GO:0005524
Pvu1g1721 1324 Gene3D - 148 459 IPR027417 -
Pvu1g1721 1324 Gene3D - 819 1045 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1721 Pvu-Chr1 42724191 42733674 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1721 K08711 - gmx:732607 2175.59