Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1720 ATGAAGGGTGGGGGTAGTTTCAGGAATGGTAGTTCATCCATTTGGAGGGACAGTGATGCAGATATCTTCTCAAAATCATTCCACAAAGAGAATGACGAAGAGGCTCTCAAATGGGCTGCCATACAGAAACTTCCCACCGTTTCGCGCATGAGGAAAGCTTTGTTCACTTCACCCGAAGGAGAAGTGAATGAGATTGATGTGCACAAACTTGGGTTGCAAGAAAGGAGAGCTTTACTTGAAAGACTGATCAGAACTGCTGAAGAGGACAATGAGAAGTTTTTGCTCAAGCTAAGGGAACGAATTGATAGAGTTGGAATTGATCTTCCGACAATAGAGGTTCGGTTTGAGAACTTGAATGTGGAAGCAGAAGCTAGTGTAGGAACTAGAGCTTTGCCTACCTTCGCTAACTTCATGGTGAATATTGTGGAGGGTATGTTGAACTCTCTTCATATTCTACAAAGTAGAAAACAACATATACATATTCTCCAGGATGTCAGTGGAATAATAAAGCCTGGCAGAATGACATTACTATTGGGCCCTCCAAGTTCTGGAAAAACCACACTATTGTTGGCCTTGGCAGCAAAACTTGATCCAAAGTTAAAGTTTTCTGGAAAGGTGACTTATAATGGTCATGGGATGGATGAGTTTGTACCCCAAAGAACTGCTGCATATGTCAATCAAAATGATCTTCATATTGCAGAGTTGACGGTCAGAGAAACCTTGAACTTCTCCGCAAGAGTCCAAGGAGTTGGATCTCGTTATGATTTGCTTGCAGAATTGTCGAGAAGAGAAAAAGAGGCAAATATCATGCCTGATCCAGATATTGATGCCTACATGAAGGCTGTAGCAACGGAAGGCCAGAAAACAACTTTGATAACAGATTACGTCCTAAGGATTTTAGGACTGGAGACATGTGCTGATACAGTTGTAGGAAATACAATGTTAAGGGGGATCTCTGGTGGACAAAAGAAACGCCTTACAACAGGAGAGATGCTGGTGGGACCAGCTAAGGCTCTATTCATGGATGAAATATCTACTGGTTTGGATAGCTCAACAACCTTCCAAATTGTGAATTCACTCAAGCAATGTGTTCACATTCTCAAAGGAACCACAGTCATCTCACTCCTGCAGCCAGCGCCCGAGACTTACAATCTTTTTGATGACATTATTCTACTCTCAGATAGTCATATAGTGTACCAGGGTCCCCGCGAATATGTGCTTCAATTTTTTCAATCAATGGGTTTTCAATGTCCTGAGAGGAAAGGTGTGGCAGACTTTTTGCAAGAAGTAACATCAAGGAAAGACCAGGAACAGTACTGGGCACACAAAGATCAACCTTATAGATTTGTCAGAACGAAAGAATTCTCCGAGGCTCTCAAGTCATTTCATGTTGGTAGAAGCCTTCGTGAAGAACTTGATAGTGAATTTGACAAGTCTAAGAGTCACCCAGCTGCTTTGACAACCAAAAAGTTTGGAGTGGGCAAATGGGAACTGTTAAAAGCTTGCTTATCAAGAGAATATTTACTTATGAAGCGCAATTCATTTGTTTACATCTTCCGGTTGAGCCAACTTGCTGTATTGGCATTTATTGCCATGACCATCTTCCTCCGGACTGAGATGCGCAGAGACTCTGTGACCGATGGCGGGATATATGTCGGTGCATTATTCTTTGGCCTTGTTGTGATTATATTGAATGGACTTGCTGAAATTCCCATGGTCGTTTTAAAGCTTCCTGTTTTCTACAAGCAAAGGGATAATCTGTTTTTTCCTTCATGGGCATATGCTCTTCCTGCATGGATCCTAAAAATCCCTATAACTTTTCTAGAAGTTGCTGTGTGGCTATTCCTAACCTACTATGTCATTGGATTTGATCCAAATATTGGAAGATTTTTTAGACAATACCTTGTTCTTTTACTAGTGAACCAGATGTCTTCCGCATTATTCCGATTTCTTGCAGGAGTTGGGAGGGAATTGAAAGCAGCTGTAAATCTTGGATCATTTATACTGACCTTCCTTTTTGCTATGAGTGGTTTTATCCTATCAAAAGACAACATAAAAAAATGGTGGTTATGGGGCTTCTGGATATCACCTATGATGTATGGACAGAATGCTATGGTAAATAACGAGTTCCTTGCGGAGAGATGGAGACATGTTCTACCTCACTCTTCGACGCCTCTTGGAGTCGAAGTTTTAAAATCACGGGGATTCTTCATCCAATCATATTGGTTTTGGATAGGCGTTCTGGTTTTGATTGGATATACATTACTTTTCAACTTTGGCTACATACTTGCTCTTTCGTATTTGAGCACACCTGGGAAGCAACATGTTATATCCGAAGAACCTGAAAATGAGCAAAATGGTGATAGTAATAAAGGAACTAATGTGATGAGATACATAAAATATAACTTCACTGGTCACTCAATTAAAGTGAGAAATGGCGAAAGTATATGTGGAAATACATCTTCCCATGCTTTTCCCTCTAGCTATAGAGGAATGGTTCTTCCTTTTGAACCACATTCTATCACCTTTGATGAAGTAACATATGCTGTGGACATGCCACAGGAAATGAGGAACCAAGGAATTGCTGAGAATAAATTGGTTCTTTTGAAGGGTGTCACTGGCTCCTTTAGGCCAGGTGTTCTCACTGCTCTAATGGGTGTTACCGGAGCAGGCAAAACAACTCTGATGGAT 2691 0.4103 MKGGGSFRNGSSSIWRDSDADIFSKSFHKENDEEALKWAAIQKLPTVSRMRKALFTSPEGEVNEIDVHKLGLQERRALLERLIRTAEEDNEKFLLKLRERIDRVGIDLPTIEVRFENLNVEAEASVGTRALPTFANFMVNIVEGMLNSLHILQSRKQHIHILQDVSGIIKPGRMTLLLGPPSSGKTTLLLALAAKLDPKLKFSGKVTYNGHGMDEFVPQRTAAYVNQNDLHIAELTVRETLNFSARVQGVGSRYDLLAELSRREKEANIMPDPDIDAYMKAVATEGQKTTLITDYVLRILGLETCADTVVGNTMLRGISGGQKKRLTTGEMLVGPAKALFMDEISTGLDSSTTFQIVNSLKQCVHILKGTTVISLLQPAPETYNLFDDIILLSDSHIVYQGPREYVLQFFQSMGFQCPERKGVADFLQEVTSRKDQEQYWAHKDQPYRFVRTKEFSEALKSFHVGRSLREELDSEFDKSKSHPAALTTKKFGVGKWELLKACLSREYLLMKRNSFVYIFRLSQLAVLAFIAMTIFLRTEMRRDSVTDGGIYVGALFFGLVVIILNGLAEIPMVVLKLPVFYKQRDNLFFPSWAYALPAWILKIPITFLEVAVWLFLTYYVIGFDPNIGRFFRQYLVLLLVNQMSSALFRFLAGVGRELKAAVNLGSFILTFLFAMSGFILSKDNIKKWWLWGFWISPMMYGQNAMVNNEFLAERWRHVLPHSSTPLGVEVLKSRGFFIQSYWFWIGVLVLIGYTLLFNFGYILALSYLSTPGKQHVISEEPENEQNGDSNKGTNVMRYIKYNFTGHSIKVRNGESICGNTSSHAFPSSYRGMVLPFEPHSITFDEVTYAVDMPQEMRNQGIAENKLVLLKGVTGSFRPGVLTALMGVTGAGKTTLMD 897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1720 897 Coils Coil 69 89 - -
Pvu1g1720 897 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 3 897 - -
Pvu1g1720 897 SMART AAA_5 171 396 IPR003593 -
Pvu1g1720 897 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 841 896 IPR027417 -
Pvu1g1720 897 PANTHER ATP-BINDING CASSETTE TRANSPORTER 3 897 - -
Pvu1g1720 897 Pfam Plant PDR ABC transporter associated 715 777 IPR013581 -
Pvu1g1720 897 Pfam ABC-2 type transporter 498 710 IPR013525 GO:0016020|GO:0140359
Pvu1g1720 897 Pfam ABC-transporter N-terminal 86 137 IPR029481 -
Pvu1g1720 897 Pfam ABC transporter 162 344 IPR003439 GO:0005524
Pvu1g1720 897 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 157 419 IPR027417 -
Pvu1g1720 897 Gene3D - 835 897 IPR027417 -
Pvu1g1720 897 Gene3D - 148 460 IPR027417 -
Pvu1g1720 897 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 146 419 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1720 Pvu-Chr1 42680400 42684943 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1720 K08711 - pvu:PHAVU_001G1659000 1774.99